{"id":"W4366602029","doi":"10.1007/s10096-023-04606-9","title":"Genomic characterization of emerging invasive Streptococcus agalactiae serotype VIII in Alberta, Canada","year":2023,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Neonatal and Maternal Infections","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"Public Health Agency of Canada; Provincial Laboratory of Public Health; University of Alberta","funders":"Ministry of Economic Development and Trade, Government of Alberta; Government of Alberta","keywords":"Multilocus sequence typing; Serotype; Biology; Clindamycin; Microbiology; Antibiotic resistance; Virology; Erythromycin; Typing; Penicillin; Tetracycline; Streptococcus agalactiae; Molecular epidemiology; Streptococcus; Genotype; Antibiotics; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004017046,0.0004557349,0.0004207398,0.002548374,0.001975744,0.001582135,0.0007500295,0.0004318221,0.001520641],"category_scores_gemma":[0.0009876949,0.0002111813,0.0003877766,0.004418609,0.0005243586,0.0001069525,0.0005241862,0.0005655859,0.0003494313],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01352421,"about_ca_system_score_gemma":0.02400061,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9845688,"about_ca_topic_score_gemma":0.9904462,"domain_scores_codex":[0.9991865,0.00003278088,0.00003004425,0.0001468688,0.0003735554,0.0002303874],"domain_scores_gemma":[0.9986563,0.000073991,0.0001051216,0.00002539996,0.0008822245,0.0002568794],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009293621,0.0001945211,0.8484614,0.0002993467,0.0001821544,0.003166796,0.007219638,0.001841453,0.06556979,0.001814203,0.008415823,0.06190553],"study_design_scores_gemma":[0.00001613665,0.00007925931,0.9766335,0.000088226,0.00006116944,0.0004742732,0.004876556,0.0005477257,0.001591914,0.00006999868,0.01554493,0.00001640051],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9685001,0.001854292,0.001309159,0.000748604,0.00006117953,0.0001689907,0.0154374,0.00005248446,0.01186783],"genre_scores_gemma":[0.974551,0.001925685,0.002682076,0.0006012201,0.00002859821,0.00004077278,0.01122874,0.00003691647,0.008905028],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01543117,"threshold_uncertainty_score":0.09812546,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01783951345476538,"score_gpt":0.2907866713933026,"score_spread":0.2729471579385372,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}