{"id":"W4366817432","doi":"10.1371/journal.pbio.3002092","title":"Cheating leads to the evolution of multipartite viruses","year":2023,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada; H2020 European Research Council; James S. McDonnell Foundation","keywords":"Multipartite; Biology; Cheating; Genome; Genetics; Viral evolution; Evolutionary biology; Coinfection; Replication (statistics); Capsid; Gene; Virology; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001559993,0.00007243423,0.00008824301,0.00004589684,0.00005911348,0.00000290306,0.000161495,0.00009641943,0.00001170736],"category_scores_gemma":[0.000251996,0.00005379147,0.00004553623,0.0001968016,0.00007721442,7.870652e-7,0.0001294027,0.00004322028,0.0001167684],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001298509,"about_ca_system_score_gemma":0.00003605578,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003876955,"about_ca_topic_score_gemma":0.0001914558,"domain_scores_codex":[0.9993613,0.00006556181,0.0001538528,0.0001876548,0.00004658977,0.000185092],"domain_scores_gemma":[0.9995905,0.00002046449,0.00004585718,0.0002456421,0.00006169608,0.00003581783],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002096106,0.00001948922,0.03903835,0.000006292582,0.00002053626,1.187418e-7,0.0000549245,0.001472794,0.9569747,0.0005444477,0.001397435,0.0004499132],"study_design_scores_gemma":[0.001146523,0.001578327,0.1929442,0.00004364615,0.00007006155,0.0000120207,0.0007643664,0.03049853,0.6636074,0.0009830606,0.1077106,0.0006412263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952701,0.0002131373,0.003138114,0.0004799124,0.0001264101,0.0001359047,0.00003231753,0.00002456917,0.0005795906],"genre_scores_gemma":[0.9985251,0.00003863973,0.0004121776,0.0003323643,0.0001435286,0.00002594077,0.00006296414,0.000009205381,0.00045003],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2933674,"threshold_uncertainty_score":0.2193553,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02229599533405979,"score_gpt":0.2901085910841574,"score_spread":0.2678125957500976,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}