{"id":"W4366984108","doi":"10.1094/phyto-01-23-0022-sa","title":"Phylogenomic Insights on the <i>Xanthomonas translucens</i> Complex, and Development of a TaqMan Real-Time Assay for Specific Detection of pv. <i>translucens</i> on Barley","year":2023,"lang":"en","type":"article","venue":"Phytopathology","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Manitoba; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Manitoba Crop Alliance; University of Saskatchewan","keywords":"Biology; TaqMan; Real-time polymerase chain reaction; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002348128,0.0004434277,0.0002124935,0.0006003695,0.0002731216,0.000616015,0.0001679406,0.0002793529,0.0007688895],"category_scores_gemma":[0.0003389883,0.0002046772,0.0004334197,0.0005364481,0.0002180081,0.0002412632,0.0003036006,0.0004628678,0.0003465809],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005068787,"about_ca_system_score_gemma":0.0003322715,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002380468,"about_ca_topic_score_gemma":0.003071231,"domain_scores_codex":[0.9997539,0.00002254543,0.00001700427,0.00009332621,0.0000707802,0.00004238915],"domain_scores_gemma":[0.9998487,0.00002511744,0.00006348506,0.00001972314,0.00002217369,0.00002067322],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006304904,0.00001490783,0.004595583,0.00003784911,0.000006917556,0.00004892949,0.00007490529,0.0001167078,0.9921449,0.0001540605,0.00004977126,0.002692514],"study_design_scores_gemma":[0.00001265211,0.0003837025,0.2684441,0.00004985669,0.0000969661,0.0008472982,0.0004962446,0.00417191,0.7141778,0.0003964392,0.01089544,0.0000275333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9812556,0.0008379106,0.01123138,0.0001656371,0.00001921217,0.00006104234,0.004083197,0.0001513407,0.002194676],"genre_scores_gemma":[0.9720466,0.0009083183,0.01491335,0.0001230339,0.00001624355,0.00008212317,0.00819595,0.00008225987,0.003632127],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.002380468,"threshold_uncertainty_score":0.004733264,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04863352097379233,"score_gpt":0.2224589218179755,"score_spread":0.1738254008441831,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}