{"id":"W4366998110","doi":"10.1101/2023.04.25.538270","title":"Turicibacterales protect mice from severe <i>Citrobacter rodentium</i> infection","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Institutes of Health; Vanderbilt University","keywords":"Citrobacter rodentium; Citrobacter; Microbiology; Biology; Enterobacteriaceae; Pathogen; Escherichia coli; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003464377,0.001362048,0.0007253208,0.001115378,0.0002965867,0.0005870876,0.0005699641,0.001341601,0.002764217],"category_scores_gemma":[0.000228072,0.0004491885,0.0006779605,0.0002388323,0.0005460128,0.0005215997,0.0004399065,0.002134909,0.0008468703],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000375854,"about_ca_system_score_gemma":0.0002887881,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008585471,"about_ca_topic_score_gemma":0.001114427,"domain_scores_codex":[0.9994751,0.00008856731,0.00006710848,0.0001148319,0.00008020749,0.0001743341],"domain_scores_gemma":[0.9989503,0.00006670861,0.0003670059,0.0001074764,0.00007601851,0.0004326032],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001557945,0.0005812563,0.000449385,0.0001086716,0.0000199625,0.00009605633,0.00003719639,0.0001040088,0.9951445,0.00009592459,0.000202555,0.001602484],"study_design_scores_gemma":[0.0003495371,0.0146657,0.01718859,0.0001105401,0.00008972379,0.0008588437,0.0002617577,0.001409689,0.9601031,0.0001846292,0.004729412,0.00004844008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9899297,0.002516176,0.001712705,0.0005508081,0.0002175793,0.000110664,0.001902793,0.0006347786,0.002424704],"genre_scores_gemma":[0.9865253,0.001320748,0.002458047,0.000494673,0.00006743408,0.0001771549,0.00181873,0.0001408786,0.006997196],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002764217,"threshold_uncertainty_score":0.009247243,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0135271854851994,"score_gpt":0.2247494163249612,"score_spread":0.2112222308397618,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}