{"id":"W4366998747","doi":"10.1093/dnares/dsad006","title":"Telomere-to-telomere genome assembly of matsutake (<i>Tricholoma matsutake</i>)","year":2023,"lang":"en","type":"article","venue":"DNA Research","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science","keywords":"Biology; Telomere; Genome; Intergenic region; Genetics; Gene; Genomics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001340782,0.0004923714,0.0004191959,0.000968703,0.0006092063,0.0004307484,0.0003352795,0.0004827628,0.0009689009],"category_scores_gemma":[0.0003513649,0.0002905855,0.0007737339,0.0007079145,0.0001094054,0.0004599787,0.0005264661,0.0008416741,0.0008995308],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002641842,"about_ca_system_score_gemma":0.00036028,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003359397,"about_ca_topic_score_gemma":0.006515905,"domain_scores_codex":[0.9999095,0.000007409604,0.000007935286,0.00003311462,0.00002265393,0.00001935747],"domain_scores_gemma":[0.9997607,0.00004148125,0.00004999362,0.00002874953,0.00005981354,0.0000593295],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000151682,0.00002220973,0.002762218,0.0002014809,0.00002761182,0.0002406623,0.0002286825,0.0002539051,0.9881585,0.00008552222,0.0002223802,0.007645088],"study_design_scores_gemma":[0.00005764675,0.0006521257,0.3632557,0.0001808742,0.0006570379,0.002829601,0.001493613,0.01194334,0.5445175,0.0008968271,0.07334945,0.00016634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9351908,0.002984406,0.03844698,0.0002580938,0.0001234925,0.0001596588,0.0182059,0.0008030919,0.003827608],"genre_scores_gemma":[0.7940464,0.002428211,0.1109314,0.0001930071,0.00005166538,0.0001749417,0.08578493,0.000734682,0.005654729],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003359397,"threshold_uncertainty_score":0.006679714,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06114990520486994,"score_gpt":0.3529971449799735,"score_spread":0.2918472397751036,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}