{"id":"W4366998849","doi":"10.1101/2023.04.23.537973","title":"Retrospective model utilizing biopsies, granulosa cells, and polar body to predict oocyte competence in bovine","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Ottawa Fertility Centre","funders":"","keywords":"Oocyte; Blastocyst; Polar body; Biology; Andrology; Embryogenesis; Cell biology; Embryo; DNA methylation; Genetics; Gene; Gene expression; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008420592,0.0006577718,0.0004754467,0.0006819707,0.0002686652,0.001014038,0.0007217189,0.0008083169,0.001865596],"category_scores_gemma":[0.001123864,0.0004877611,0.0005631082,0.0004724402,0.000340158,0.0005047445,0.0005020821,0.0004487941,0.0005405028],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007312184,"about_ca_system_score_gemma":0.0007951693,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01280591,"about_ca_topic_score_gemma":0.01182155,"domain_scores_codex":[0.9997297,0.0000427892,0.00001340094,0.0001320733,0.00004527171,0.00003680722],"domain_scores_gemma":[0.9996433,0.000136377,0.00008337496,0.00003531076,0.00005997284,0.00004163212],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.003513823,0.0006487434,0.3005608,0.0007520425,0.0004743907,0.0009931914,0.0004807017,0.365868,0.2383971,0.003635792,0.002936204,0.08173915],"study_design_scores_gemma":[0.00004893526,0.0004612927,0.04680802,0.00004053549,0.0001274666,0.000345224,0.0001102704,0.9367439,0.01199126,0.001610236,0.001661124,0.00005179686],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8178573,0.002746582,0.1699772,0.0003586378,0.00008067962,0.0002233132,0.004527649,0.0007601071,0.003468479],"genre_scores_gemma":[0.9646568,0.0008100081,0.02890552,0.00009368623,0.00002503077,0.0002202128,0.00327318,0.0000552831,0.001960305],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01280591,"threshold_uncertainty_score":0.02546275,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0239917009748644,"score_gpt":0.2470677822371626,"score_spread":0.2230760812622982,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}