{"id":"W4367047720","doi":"10.1128/aem.00025-23","title":"“ <i>Candidatus</i> Nealsonbacteria” Are Likely Biomass Recycling Ectosymbionts of Methanogenic Archaea in a Stable Benzene-Degrading Enrichment Culture","year":2023,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health; Innotech Alberta; Government of Ontario; University of Alberta; University of Waterloo; Mitacs; Genome Canada; Ontario Genomics; Alberta Innovates; Life Sciences Research Foundation","keywords":"Archaea; Candidatus; Phylum; Biology; Enrichment culture; Biomass (ecology); Benzene; Bacteria; Microbiology; Metagenomics; Microorganism; Genetics; Gene; Chemistry; Ecology; 16S ribosomal RNA; Organic chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009665209,0.0002472312,0.0001174094,0.0001647481,0.0001951522,0.0003973015,0.0001560907,0.000147472,0.0009117237],"category_scores_gemma":[0.0001491643,0.0001041806,0.0001113646,0.0001812466,0.0001556386,0.0001485634,0.0002621788,0.0001943436,0.0002257824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001454708,"about_ca_system_score_gemma":0.0001939333,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002165683,"about_ca_topic_score_gemma":0.00267676,"domain_scores_codex":[0.9999058,0.000008426343,0.000006714057,0.00003240576,0.00002101127,0.0000257067],"domain_scores_gemma":[0.9999276,0.000008932396,0.00001620026,0.00001101325,0.00001758166,0.00001873201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003318672,0.000003497721,0.000816506,0.00001049698,0.000001415206,0.0000316074,0.00001478179,0.00001447704,0.998151,0.00004041784,0.00002508278,0.0008575341],"study_design_scores_gemma":[0.000004243846,0.00006400513,0.02936451,0.000007720754,0.00001366307,0.0003999448,0.0001150414,0.0004892173,0.9669597,0.00004558541,0.002529763,0.000006558546],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955431,0.0002663027,0.001959865,0.00006057924,0.00001065861,0.00002115449,0.0004510924,0.00004203294,0.001645188],"genre_scores_gemma":[0.9904248,0.0001887039,0.00581318,0.00003619167,0.000004782546,0.00002081078,0.00106178,0.00001680516,0.002432961],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002165683,"threshold_uncertainty_score":0.004306138,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00813035714799803,"score_gpt":0.2009057694947158,"score_spread":0.1927754123467177,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}