{"id":"W4367055595","doi":"10.3390/microorganisms11051126","title":"Gut Microbiome and Associated Metabolites Following Bariatric Surgery and Comparison to Healthy Controls","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"University of Western Australia; Australian Government; National Heart Foundation of Australia; Wellcome Trust","keywords":"Sleeve gastrectomy; Cohort; Medicine; Microbiome; Gut flora; Obesity; Internal medicine; Cohort study; Streptococcus; Physiology; Gastroenterology; Surgery; Weight loss; Gastric bypass; Immunology; Biology; Bioinformatics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005779446,0.0002151771,0.0004535454,0.0001928783,0.0002316911,0.00008006866,0.0001016457,0.0002030399,0.000009512936],"category_scores_gemma":[0.0001418252,0.0002186376,0.0000912789,0.0004168666,0.00003841428,0.000005244262,0.0001830969,0.0001036307,0.00005573978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002417013,"about_ca_system_score_gemma":0.0001122583,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007464467,"about_ca_topic_score_gemma":0.00007866252,"domain_scores_codex":[0.9984403,0.0001105482,0.0003573382,0.0004814214,0.00007299204,0.0005374301],"domain_scores_gemma":[0.9993469,0.00007325887,0.00009515108,0.0002072574,0.00004836394,0.0002291425],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003526749,0.0000337186,0.02472733,0.00002915827,0.00007388763,0.000004338918,0.0001502282,7.891981e-7,0.9606178,0.0000114079,0.01380252,0.0005135639],"study_design_scores_gemma":[0.002421245,0.0004602442,0.5411178,0.00005366973,0.0001559113,0.00004654956,0.0003766717,0.00001536675,0.3621877,0.00006449288,0.09223663,0.0008637191],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936029,0.004093288,0.00009576719,0.001428642,0.0002938,0.0003170312,0.00008507664,0.00006135461,0.00002219394],"genre_scores_gemma":[0.9962642,0.0004149464,0.0004405476,0.001995465,0.0001092919,0.00001083356,0.0003273816,0.00004386765,0.0003934181],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5984301,"threshold_uncertainty_score":0.8915782,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01439798989101085,"score_gpt":0.273172881677699,"score_spread":0.2587748917866882,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}