{"id":"W4367301684","doi":"10.1016/j.mucimm.2023.04.001","title":"Nonoptimal bacteria species induce neutrophil-driven inflammation and barrier disruption in the female genital tract","year":2023,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"Canadian Institutes of Health Research; University of Manitoba","keywords":"Inflammation; Genital tract; Female circumcision; Bacteria; Immunology; Microbiology; Biology; Sex organ; Medicine; Physiology; Genetics; Gynecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000596796,0.0001894463,0.0002376189,0.0004524032,0.0002911949,0.00005769116,0.0002674759,0.0003063276,0.0003015117],"category_scores_gemma":[0.0002859801,0.0001481076,0.00006168676,0.0005424192,0.0005460797,0.0003468915,0.0001579457,0.0007462355,0.001354121],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007273693,"about_ca_system_score_gemma":0.00005478656,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001271322,"about_ca_topic_score_gemma":0.00005099223,"domain_scores_codex":[0.9980612,0.0006610518,0.0003234998,0.0004087726,0.00005377798,0.0004916473],"domain_scores_gemma":[0.999082,0.0003260309,0.00008537745,0.000411291,0.00008126437,0.0000140281],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001545886,0.00009819635,0.01972053,0.000008823823,0.00007625331,0.00003418333,0.002053687,0.00002820945,0.9720022,0.001193275,0.0001062832,0.004523743],"study_design_scores_gemma":[0.0008242178,0.0003127562,0.9458443,0.000007188433,0.00001560268,0.0004459697,0.001507638,0.00001634082,0.04208105,0.0001618571,0.008618243,0.0001648507],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959388,0.0003474153,0.00001331412,0.001392013,0.0006378356,0.0004661459,0.00002670993,0.0001083464,0.001069404],"genre_scores_gemma":[0.9981628,0.0002372647,0.00002928298,0.00001554261,0.0001190571,0.0001352022,0.0002457705,0.00001971409,0.001035371],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9299212,"threshold_uncertainty_score":0.9994234,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0318260544711174,"score_gpt":0.2885522981907288,"score_spread":0.2567262437196113,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}