{"id":"W4367838407","doi":"10.1101/2023.05.02.539155","title":"Host-Microbiome Associations in Saliva Predict COVID-19 Severity","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Salivary Gland Disorders and Functions","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Institutes of Health; Dasman Diabetes Institute; L'Oreal USA","keywords":"Saliva; Microbiome; Immunology; Immune system; Pathogenesis; Biology; Oral Microbiome; Medicine; Bioinformatics; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004593392,0.0003810257,0.0004836937,0.0006887978,0.0003128719,0.0007888603,0.0001163944,0.0003917485,0.001795652],"category_scores_gemma":[0.00101541,0.0001610914,0.0003876207,0.0004816965,0.0001793983,0.0003304493,0.0006737152,0.0005232131,0.0002483262],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000146031,"about_ca_system_score_gemma":0.000150956,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006429204,"about_ca_topic_score_gemma":0.0008157526,"domain_scores_codex":[0.9997376,0.00006580844,0.00003726394,0.00005218272,0.00005649276,0.00005058992],"domain_scores_gemma":[0.9993488,0.0001072794,0.0003016382,0.00003159602,0.0001006557,0.0001099675],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004530065,0.00004999272,0.984719,0.00003486318,0.00005587456,0.00009024145,0.00005761721,0.00007680459,0.01095663,0.00001331935,0.00008107232,0.003411514],"study_design_scores_gemma":[0.000003718118,0.0001991984,0.9971191,0.00001172553,0.0000283217,0.0003281074,0.0002078475,0.0005657042,0.001344505,0.00004190681,0.0001446242,0.000005142064],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983078,0.000696119,0.0002708045,0.00002625618,0.000008297388,0.00001626289,0.0003532317,0.000008195389,0.0003128538],"genre_scores_gemma":[0.9990755,0.000160133,0.0003308778,0.00001219678,0.000006852672,0.000009361196,0.0002448275,0.000001622818,0.0001585327],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001795652,"threshold_uncertainty_score":0.006007075,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03250461649101671,"score_gpt":0.2682494828475887,"score_spread":0.235744866356572,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}