{"id":"W4368370416","doi":"10.1101/2023.05.03.539263","title":"Cities as parasitic amplifiers? Malaria prevalence and diversity in great tits along an urbanization gradient","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bird parasitology and diseases","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Amgen (Canada); University of Toronto","funders":"Agence Nationale de la Recherche; Gordon and Betty Moore Foundation","keywords":"Urbanization; Plasmodium (life cycle); Haemoproteus; Biology; Leucocytozoon; Avian malaria; Parus; Malaria; Ecology; Diversity (politics); Zoology; Geography; Parasite hosting; Plasmodium falciparum; Immunology; Gametocyte","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000166454,0.0001080303,0.0001400986,0.0005715591,0.000372393,0.0004530879,0.0001247538,0.0002057485,0.001441522],"category_scores_gemma":[0.0004117072,0.0001391822,0.0001592604,0.0005066784,0.0003594569,0.0002975074,0.0003614611,0.0002190505,0.0001301162],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001156524,"about_ca_system_score_gemma":0.0001155018,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00400321,"about_ca_topic_score_gemma":0.008259317,"domain_scores_codex":[0.9998524,0.00004547798,0.000009701954,0.00003872445,0.00001977902,0.00003387897],"domain_scores_gemma":[0.9996322,0.00005349303,0.0001528993,0.00002035009,0.00004700528,0.00009402763],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005116374,0.00001545245,0.9975411,0.000007137957,0.00002189832,0.00006214385,0.0002679671,0.00002270438,0.001071391,0.00002814761,0.00003696915,0.0008740055],"study_design_scores_gemma":[4.185524e-7,0.00001653554,0.9995201,0.000001381106,0.000004252359,0.00005520715,0.0002720246,0.00005754416,0.00002439689,0.000008735005,0.00003853231,9.431216e-7],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999696,0.00004130444,0.00002394155,0.00001443607,0.000001389267,0.000001759777,0.00003781225,8.535737e-7,0.0001824486],"genre_scores_gemma":[0.9998645,0.00001745063,0.00002145162,0.000003775194,0.000002588086,0.000001351795,0.00002679408,3.620868e-7,0.00006170162],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00400321,"threshold_uncertainty_score":0.007959783,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0248437135564331,"score_gpt":0.2406499649447749,"score_spread":0.2158062513883418,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}