{"id":"W4376116202","doi":"10.1098/rspb.2022.2572","title":"Per-pathogen virulence of HIV-1 subtypes A, C and D","year":2023,"lang":"en","type":"article","venue":"Proceedings of the Royal Society B Biological Sciences","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Virulence; Pathogen; Biology; Viral load; Virology; Human immunodeficiency virus (HIV); Immunology; Sexually transmitted disease; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002032882,0.0003032,0.0004029563,0.0008739908,0.0002711109,0.001090056,0.0006579254,0.0006183226,0.001860251],"category_scores_gemma":[0.00686175,0.0002421363,0.0007077759,0.0005702325,0.0003622144,0.0005737656,0.0005223988,0.0008413663,0.0003099068],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006618025,"about_ca_system_score_gemma":0.0004776243,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004980773,"about_ca_topic_score_gemma":0.003234879,"domain_scores_codex":[0.998767,0.0004861887,0.0001030637,0.0002109294,0.0002316955,0.0002010834],"domain_scores_gemma":[0.9938069,0.002924226,0.00152829,0.0009853401,0.00037028,0.0003849657],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000573813,0.0001333945,0.9532637,0.00006462566,0.000205921,0.0001641847,0.0002654257,0.006105688,0.02339888,0.00126421,0.000180909,0.01437924],"study_design_scores_gemma":[0.00001849841,0.0004308122,0.9703353,0.00002046135,0.00005978004,0.0008043191,0.0003569049,0.02117898,0.004886048,0.001355313,0.0005205058,0.00003305914],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970106,0.0002292804,0.001454843,0.0000613278,0.000005088956,0.0000148731,0.0004509554,0.00001693118,0.00075605],"genre_scores_gemma":[0.9983656,0.00007884964,0.0009216184,0.00001350226,0.000003039369,0.000006811874,0.0003817897,0.000004948018,0.00022371],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004980773,"threshold_uncertainty_score":0.01075101,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02828308104927125,"score_gpt":0.2640323387569806,"score_spread":0.2357492577077094,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}