{"id":"W4377023946","doi":"10.1016/j.jbc.2023.104840","title":"RNA editing of AZIN1 coding sites is catalyzed by ADAR1 p150 after splicing","year":2023,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science; Waksman Foundation of Japan; Nippon Foundation; Senri Life Science Foundation; National Institute of Genetics; Ministry of Education, Culture, Sports, Science and Technology; Osaka University; Astellas Pharma; Astellas Foundation for Research on Metabolic Disorders; Japan Intractable Diseases Research Foundation; Uehara Memorial Foundation; Japan Agency for Medical Research and Development; Moritani Scholarship Foundation; Takeda Science Foundation","keywords":"RNA editing; ADAR; RNA splicing; Biology; RNA; Intron; Exon; RNA silencing; Messenger RNA; Molecular biology; Coding region; Cell biology; Genetics; Gene; RNA interference","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002296017,0.0001222525,0.0002125624,0.00002240739,0.00003782774,0.00001412724,0.0001649219,0.0001825233,0.0002017316],"category_scores_gemma":[0.0003012706,0.00009265031,0.0001969192,0.0001165242,0.00009273771,0.000005245578,0.00008955826,0.0001106893,0.000005094867],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001216452,"about_ca_system_score_gemma":0.00003729543,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001321781,"about_ca_topic_score_gemma":1.312738e-7,"domain_scores_codex":[0.9990712,0.00002268757,0.0004045272,0.0001642044,0.0001559925,0.00018133],"domain_scores_gemma":[0.9992209,0.00003066731,0.0003300975,0.0001362486,0.0001425246,0.0001395521],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001322465,0.00003632629,0.01770545,0.00004271237,0.00003728145,0.00001528171,0.00001522478,0.00000899258,0.9714877,8.226712e-7,0.01015223,0.0003657422],"study_design_scores_gemma":[0.0004964231,0.00005399947,0.006215759,0.00003994124,0.00001788889,0.00002569546,0.0001301582,0.00005005054,0.9901605,0.00003519682,0.002662505,0.0001118316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983613,0.0007371579,0.0001057217,0.0002615274,0.00005421797,0.00003126714,0.00006132814,0.000008547496,0.0003789269],"genre_scores_gemma":[0.9985763,0.0002004743,0.0001174702,0.0001799655,0.0004900081,0.000002072686,0.0001052971,0.000008717423,0.0003196695],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01867286,"threshold_uncertainty_score":0.377817,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01617747543832442,"score_gpt":0.2621823479564758,"score_spread":0.2460048725181513,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}