{"id":"W4377092853","doi":"10.1371/journal.ppat.1011318","title":"The cell envelope of Mycobacterium abscessus and its role in pathogenesis","year":2023,"lang":"en","type":"review","venue":"PLoS Pathogens","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Mycobacterium abscessus; Virulence; Cell envelope; Pathogenesis; Microbiology; Efflux; Biology; Secretion; Pathogen; Envelope (radar); Cystic fibrosis; Mycobacterium; Immunology; Genetics; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004047598,0.0005461603,0.001167128,0.001760005,0.0002077712,0.0008905597,0.0005219419,0.001000118,0.002452334],"category_scores_gemma":[0.0005905271,0.0002177341,0.0004109318,0.001310895,0.0003694176,0.001020577,0.0005676738,0.001158895,0.001594736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005188205,"about_ca_system_score_gemma":0.001046753,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000978015,"about_ca_topic_score_gemma":0.001201098,"domain_scores_codex":[0.9998227,0.00003312628,0.00002827988,0.00002475556,0.00006793954,0.00002326314],"domain_scores_gemma":[0.9998003,0.00008323178,0.00003390093,0.00000566696,0.00005503567,0.00002200265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000122735,0.00006000922,0.0002831122,0.02885369,0.00009833682,0.0003698399,0.0001033033,0.0003884878,0.004035783,0.004346724,0.03001746,0.9313204],"study_design_scores_gemma":[0.0000123467,0.00009445888,0.0009742304,0.003773679,0.00008751536,0.001783615,0.00005871644,0.00006493382,0.0006343604,0.00133956,0.9911601,0.00001654844],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00009994684,0.9991255,0.00005436778,0.000176547,0.000100549,0.000002227763,0.00001309007,0.000004343891,0.0004232956],"genre_scores_gemma":[0.0007499459,0.9986153,0.0000890446,0.000107434,0.00008597475,0.000003612716,0.00002515473,7.76549e-7,0.0003228661],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002452334,"threshold_uncertainty_score":0.008203924,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06453241758298887,"score_gpt":0.322814321936782,"score_spread":0.2582819043537931,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}