{"id":"W4378070799","doi":"10.1016/j.heliyon.2023.e16253","title":"Genome sequencing of Enterococcus faecium NT04, an oral microbiota revealed the production of enterocin A/B active against oral pathogens","year":2023,"lang":"en","type":"article","venue":"Heliyon","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Regina","funders":"","keywords":"Enterococcus faecium; Biology; Probiotic; Bacteriocin; Microbiology; Virulence; Gene; Genome; Plasmid; Whole genome sequencing; Pathogenicity island; Bacteria; Genetics; Antimicrobial; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001272857,0.0005562797,0.0003564903,0.0005438259,0.0002319262,0.000437609,0.0001738981,0.0003456931,0.001327902],"category_scores_gemma":[0.0004722648,0.0001283929,0.0005227894,0.0008030465,0.0001259298,0.0002313324,0.0003407438,0.000282125,0.0005268528],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000215324,"about_ca_system_score_gemma":0.0005912103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004032953,"about_ca_topic_score_gemma":0.002753881,"domain_scores_codex":[0.9998384,0.00001953015,0.00002747327,0.0000404522,0.00004591085,0.00002831999],"domain_scores_gemma":[0.9997372,0.00003875656,0.00008484156,0.00002207154,0.00008819098,0.00002897002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005090222,0.0000821825,0.0133506,0.0003038777,0.0000353846,0.0008584587,0.000165983,0.0002317128,0.9726681,0.0000436687,0.0001811881,0.01156979],"study_design_scores_gemma":[0.00006659595,0.001492727,0.3673784,0.000227319,0.0005309358,0.006876512,0.001978686,0.003729401,0.5947853,0.0001525259,0.02272046,0.0000611311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9902081,0.0007333369,0.002031353,0.0001091233,0.00002500245,0.00004574509,0.005442818,0.00005811957,0.00134636],"genre_scores_gemma":[0.9639367,0.001252386,0.01393539,0.0001210817,0.00001411692,0.00006352581,0.01585337,0.00005200687,0.004771399],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004032953,"threshold_uncertainty_score":0.008018911,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03708860523155205,"score_gpt":0.24383135893422,"score_spread":0.206742753702668,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}