{"id":"W4378228840","doi":"10.3390/microorganisms11061372","title":"Apple Root Microbiome as Indicator of Plant Adaptation to Apple Replant Diseased Soils","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Dalhousie University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Agricultural Research Service; U.S. Department of Agriculture","keywords":"Orchard; Biology; Malus; Actinobacteria; Microbiome; Soil water; Botany; Apple tree; Microorganism; Firmicutes; Soil microbiology; Horticulture; Agronomy; 16S ribosomal RNA; Ecology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001763751,0.0003508874,0.0004124974,0.0005073272,0.0002751322,0.0008773341,0.0001596097,0.0003124546,0.0005136761],"category_scores_gemma":[0.0002138478,0.0001517248,0.000142012,0.0004302172,0.0002251167,0.0002416497,0.0004294821,0.0002553095,0.0001792358],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002998667,"about_ca_system_score_gemma":0.0003997888,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01208081,"about_ca_topic_score_gemma":0.02237362,"domain_scores_codex":[0.9997506,0.00001882801,0.00001151748,0.00009011059,0.00006762746,0.00006135054],"domain_scores_gemma":[0.9998092,0.00002180195,0.00004370788,0.000007026693,0.00006214524,0.00005617659],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000240713,0.00004436974,0.07413878,0.000162489,0.0000239187,0.0001071116,0.0003900149,0.00008484445,0.921419,0.00002967382,0.00005541971,0.003303766],"study_design_scores_gemma":[0.000004237046,0.000215735,0.9730665,0.00001731314,0.00002556704,0.0001656742,0.000605083,0.0003537977,0.02490569,0.00002111274,0.0006091138,0.00001014198],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980981,0.0002962254,0.0001939321,0.0000104309,0.00000339169,0.00001898574,0.0009312385,0.00000977603,0.000437856],"genre_scores_gemma":[0.9958019,0.0004398471,0.0009660394,0.00004621127,0.000004059379,0.00002574211,0.001733322,0.000007277562,0.0009757205],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01208081,"threshold_uncertainty_score":0.02402103,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008452674970697339,"score_gpt":0.2186579925811139,"score_spread":0.2102053176104166,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}