{"id":"W4378469401","doi":"10.3390/antibiotics12060960","title":"Genomic Characterization of Carbapenem-Resistant Bacteria from Beef Cattle Feedlots","year":2023,"lang":"en","type":"article","venue":"Antibiotics","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Lethbridge","funders":"Government of Canada; Government of Alberta; University of Calgary","keywords":"Ertapenem; Microbiology; Carbapenem; Biology; Stenotrophomonas maltophilia; Acinetobacter; Pseudomonas aeruginosa; Imipenem; Meropenem; Drug resistance; Antibiotic resistance; Bacteria; Antibiotics; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000134123,0.0002054618,0.0002700454,0.00007578024,0.00006952052,0.00003648731,0.0003035865,0.0002136019,0.00006283997],"category_scores_gemma":[0.00006069105,0.0002129367,0.0001016464,0.0002216392,0.0001299144,0.000007541898,0.000177494,0.00006712887,0.0001199184],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000192261,"about_ca_system_score_gemma":0.00009101891,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007381177,"about_ca_topic_score_gemma":0.00004576905,"domain_scores_codex":[0.9986607,0.000055059,0.000402042,0.0004083782,0.0001592945,0.0003145016],"domain_scores_gemma":[0.998993,0.00001899818,0.0002276745,0.0005831317,0.0001013536,0.000075884],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009251485,0.00003769026,0.05699607,0.00003457306,0.00006957232,0.00000430614,0.00004763231,0.000006592583,0.9419627,0.00006017746,0.0004016767,0.0002865214],"study_design_scores_gemma":[0.0001882653,0.00006619142,0.5194038,0.00002736301,0.00002245302,0.000001043562,0.00003411358,0.00002360662,0.4771956,0.00001893745,0.002872954,0.0001457353],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980652,0.00005553395,0.0002433733,0.00007797646,0.0005859463,0.0001744502,0.0004424297,0.0000418253,0.0003133125],"genre_scores_gemma":[0.9947358,0.0005052724,0.0006798958,0.00007497922,0.0003102023,3.152528e-7,0.002701857,0.00005666023,0.0009350335],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4647671,"threshold_uncertainty_score":0.8683307,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01089461756954898,"score_gpt":0.2376609430901634,"score_spread":0.2267663255206144,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}