{"id":"W4378640129","doi":"10.1093/nar/gkad430","title":"CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins","year":2023,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of General Medical Sciences; HORIZON EUROPE Framework Programme; Università degli Studi di Padova; Ministero dell’Istruzione, dell’Università e della Ricerca; European Cooperation in Science and Technology; European Commission","keywords":"Documentation; Computer science; Resource (disambiguation); Web server; Service (business); Biology; Data science; World Wide Web; The Internet; Operating system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003128688,0.003337479,0.002722946,0.003725285,0.001236197,0.002752287,0.00282468,0.001749396,0.04997656],"category_scores_gemma":[0.009782217,0.001220503,0.001450563,0.003668338,0.0004323394,0.002347728,0.003443123,0.002966933,0.05086996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009415752,"about_ca_system_score_gemma":0.003248394,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003616008,"about_ca_topic_score_gemma":0.00372886,"domain_scores_codex":[0.9986107,0.0002237243,0.0001361662,0.0002791201,0.0006240204,0.0001261438],"domain_scores_gemma":[0.9964159,0.001347332,0.0003434783,0.0005773187,0.0008307396,0.0004852429],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0008639041,0.0002220594,0.006918886,0.001820838,0.0002301259,0.0003428919,0.0002103724,0.002915416,0.01013838,0.002554675,0.8920737,0.08170868],"study_design_scores_gemma":[0.001476287,0.0005717556,0.02293322,0.001033593,0.0003609953,0.002008674,0.0003171728,0.1262506,0.049633,0.0240269,0.7707351,0.0006526285],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.009615189,0.00168815,0.1317925,0.0006592836,0.000586723,0.0004512877,0.2512895,0.5962361,0.007681335],"genre_scores_gemma":[0.03983082,0.001576808,0.1910654,0.0006337694,0.0003144274,0.001102188,0.7050812,0.05203582,0.008359601],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.04997656,"threshold_uncertainty_score":0.1671882,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03542042578697587,"score_gpt":0.3279965579011624,"score_spread":0.2925761321141865,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}