{"id":"W4378715997","doi":"10.1038/s41467-023-38415-7","title":"Rapid evolution of A(H5N1) influenza viruses after intercontinental spread to North America","year":2023,"lang":"en","type":"article","venue":"Nature Communications","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":237,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Canadian Science Centre for Human and Animal Health","funders":"National Institute of Allergy and Infectious Diseases; American Lebanese Syrian Associated Charities; St. Jude Children's Research Hospital; U.S. Department of Health and Human Services; National Institutes of Health; National Science Foundation","keywords":"Influenza A virus subtype H5N1; Virology; Pandemic; 2019-20 coronavirus outbreak; Influenza A virus; Coronavirus disease 2019 (COVID-19); Viral evolution; Biology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Virus; Genetics; Genome; Outbreak; Gene; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002952531,0.0001022732,0.00008372343,0.0002628611,0.0005049637,0.0003259883,0.000158417,0.000272104,0.0006105175],"category_scores_gemma":[0.0003497284,0.00006224441,0.0001297072,0.0002429517,0.0002117069,0.0002181062,0.0002937255,0.0002678511,0.0001336477],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004033413,"about_ca_system_score_gemma":0.0003354923,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008552486,"about_ca_topic_score_gemma":0.01516484,"domain_scores_codex":[0.9999235,0.00001978728,0.000003421494,0.00002168611,0.000015432,0.00001625904],"domain_scores_gemma":[0.9997926,0.00002740427,0.00007528283,0.00001458303,0.00004349314,0.00004652762],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007866964,0.0001882509,0.6615394,0.00009133002,0.0001082126,0.002489678,0.003118927,0.0006544241,0.2809408,0.0007020494,0.0008184332,0.0485619],"study_design_scores_gemma":[0.000004758778,0.0001318707,0.9936671,0.00001619002,0.00001490276,0.000520134,0.0007935954,0.0002227493,0.00254518,0.00007644283,0.002002758,0.000004318569],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983339,0.000490221,0.0001124007,0.00009191233,0.00001015911,0.000003840748,0.00002829761,0.000002825089,0.0009266351],"genre_scores_gemma":[0.998676,0.0004071857,0.0003559114,0.0001016714,0.000008713443,0.000003789351,0.00008066594,0.000001901073,0.0003641816],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008552486,"threshold_uncertainty_score":0.01700544,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0774153098656355,"score_gpt":0.4069324111888758,"score_spread":0.3295171013232403,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}