{"id":"W4378836107","doi":"10.1007/s10592-023-01538-x","title":"Pooled whole genome sequencing of the endangered Banff Springs Snail, Physella johnsoni, reveals genetic separation to P. gyrina and cryptic micro-geographical genetic structure","year":2023,"lang":"en","type":"article","venue":"Conservation Genetics","topic":"Aquatic Invertebrate Ecology and Behavior","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"Bamfield Marine Sciences Centre; Parks Canada; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genetic diversity; Endangered species; Biodiversity; Population; Ecology; Population genomics; Genetic structure; Genetic variation; Nucleotide diversity; Evolutionary biology; Species complex; Conservation genetics; Genomics; Genome; Microsatellite; Genetics; Genotype; Allele; Haplotype; Phylogenetic tree; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001555603,0.0001887976,0.0002020559,0.00008208258,0.0002484495,0.00003381848,0.0002821202,0.0001643355,0.0005903487],"category_scores_gemma":[0.00006724486,0.0001652175,0.00005864073,0.0007470977,0.0002966115,0.00005437765,0.0002598554,0.000140767,0.0002402026],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000976138,"about_ca_system_score_gemma":0.00005035895,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000818441,"about_ca_topic_score_gemma":0.0002359579,"domain_scores_codex":[0.9984909,0.0001396233,0.0004061809,0.0003858152,0.000268936,0.0003085048],"domain_scores_gemma":[0.9992185,0.00007089388,0.0001795634,0.0003821947,0.00004477171,0.0001040716],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000006711569,0.00001031375,0.331263,0.00001995767,0.00001153536,0.000002595033,0.0006177585,0.003037576,0.6636918,0.000007378268,0.0007228376,0.0006086109],"study_design_scores_gemma":[0.0002445139,0.0000823357,0.9693816,0.00001841906,0.00008022175,0.0000111765,0.00008724869,0.004691658,0.02360194,0.0007982613,0.0008165723,0.0001860412],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977428,0.00009814203,0.0003571245,0.0009406548,0.0001426835,0.0006146547,0.00003265237,0.00003359261,0.00003774791],"genre_scores_gemma":[0.9920964,0.00005753181,0.006107752,0.001209471,0.00003557065,0.00002631615,0.00001902618,0.00002113041,0.0004268386],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6400898,"threshold_uncertainty_score":0.6737374,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01588440469194477,"score_gpt":0.239449834713912,"score_spread":0.2235654300219673,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}