{"id":"W4378841055","doi":"10.1002/9781119814085.ch7","title":"Diversity, Transmission and Selective Pressure on the Proteome of <i>Pseudomonas aeruginosa</i>","year":2023,"lang":"en","type":"other","venue":"","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Proteome; Pseudomonas aeruginosa; Biology; Computational biology; Proteomics; Proteogenomics; Evolutionary biology; Genetics; Microbiology; Genome; Gene; Genomics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001190782,0.000252837,0.000174311,0.00031879,0.0003948635,0.0008812282,0.0001770391,0.0002637609,0.002214919],"category_scores_gemma":[0.0001635116,0.0001170731,0.0001730039,0.0004701478,0.0002658604,0.0004278037,0.0004597606,0.0003434838,0.001165826],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003853571,"about_ca_system_score_gemma":0.0003155374,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009934083,"about_ca_topic_score_gemma":0.00238174,"domain_scores_codex":[0.9999032,0.00001060524,0.000003333576,0.00002122822,0.00004631437,0.00001528906],"domain_scores_gemma":[0.9999534,0.00001079013,0.00001026438,0.000003274605,0.00001289546,0.000009381277],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000105129,0.00003584859,0.003168903,0.0007389075,0.00001803121,0.0005371554,0.0005484294,0.0004380772,0.8798061,0.003289621,0.005320114,0.1059936],"study_design_scores_gemma":[0.00001302317,0.0003777022,0.1144844,0.0006780998,0.00009327322,0.002717265,0.001952242,0.00168628,0.4724506,0.00513166,0.400328,0.00008751169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7260215,0.1043903,0.009696648,0.004807239,0.000313583,0.00007995211,0.003728274,0.0005124366,0.1504501],"genre_scores_gemma":[0.7769306,0.1277409,0.01514812,0.001599946,0.0002616879,0.0001029125,0.004137379,0.0002298036,0.07384867],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002214919,"threshold_uncertainty_score":0.007409632,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009524821736205363,"score_gpt":0.2107347261393142,"score_spread":0.2012099044031089,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}