{"id":"W4379410106","doi":"10.1039/d3fo01468a","title":"Acid-tolerant <i>Lactiplantibacillus plantarum</i> ZDY2013 shows a colonization niche preference and interacts with enterotoxigenic <i>Bacillus cereus</i> in specific-pathogen-free mice","year":2023,"lang":"en","type":"article","venue":"Food & Function","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Natural Science Foundation of Jiangxi Province; National Natural Science Foundation of China","keywords":"Bacillus cereus; Colonization; Microbiology; Niche; Pathogen; Biology; Specific-pathogen-free; Bacteria; Virology; Genetics; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002066901,0.0002350488,0.0002213618,0.00008047482,0.0001672602,0.0001296936,0.0002292532,0.0001479847,0.00007110892],"category_scores_gemma":[0.00001924477,0.0001093192,0.0000427694,0.0008915769,0.00004464343,0.0002602873,0.0001543652,0.0002348026,0.0000570238],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004468287,"about_ca_system_score_gemma":0.00001102568,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007250663,"about_ca_topic_score_gemma":0.003153274,"domain_scores_codex":[0.9985088,0.00008288726,0.0002791912,0.0004973931,0.0002384663,0.0003932928],"domain_scores_gemma":[0.9994991,0.00007799096,0.0001265556,0.00012672,0.00006288959,0.0001066899],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.007376699,0.0002422845,0.01734777,0.00004377262,0.00007926122,0.00002843994,0.0003708296,0.00007358067,0.9583558,0.0001123718,0.002588019,0.01338117],"study_design_scores_gemma":[0.005882487,0.05306861,0.7590203,0.000708919,0.000162579,0.0003378323,0.002037758,0.002459384,0.07620737,0.0007217122,0.09735514,0.002037895],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974465,0.0002419188,0.00005160467,0.0003957392,0.0003384502,0.0006044132,0.000336174,0.0001416905,0.0004435434],"genre_scores_gemma":[0.9982972,0.0005921447,0.00003847204,0.0002302024,0.0001242372,0.00004870007,0.0005972463,0.000003994453,0.00006786353],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8821484,"threshold_uncertainty_score":0.4457908,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.025087527497945,"score_gpt":0.1800475006410009,"score_spread":0.1549599731430559,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}