{"id":"W4380302780","doi":"10.1101/2023.06.07.23291077","title":"Large scale phenotyping of long COVID inflammation reveals mechanistic subtypes of disease","year":2023,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"European and Developing Countries Clinical Trials Partnership; NIHR Leicester Biomedical Research Centre; Versus Arthritis; Grifols; National Institute for Health Research Health Protection Research Unit; Blood Cancer UK; Public Health England; Rosetrees Trust; GlaxoSmithKline; Imperial College London; Diabetes UK; NIHR Imperial Biomedical Research Centre; Manchester Biomedical Research Centre; Cystic Fibrosis Trust; Kidney Research UK; Medical Research Council; Department of Health and Social Care; Insmed; National Institute for Health and Care Research; Department for International Development; AstraZeneca; UK Research and Innovation; British HIV Association; Gilead Sciences; British Heart Foundation; Wellcome Trust; Asthma and Lung UK","keywords":"Inflammation; Neuroinflammation; Disease; Apathy; Medicine; Immunology; Cognitive decline; Depression (economics); Pathological; Cardiorespiratory fitness; Dementia; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000393126,0.0002228743,0.0003306829,0.0003075753,0.0002691921,0.0004598537,0.0001008785,0.0002952846,0.00180073],"category_scores_gemma":[0.0002986769,0.0001326558,0.000282664,0.000333946,0.0002098489,0.0002068033,0.0004953492,0.0005172557,0.0004186789],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002004755,"about_ca_system_score_gemma":0.0001210364,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004310446,"about_ca_topic_score_gemma":0.0005285796,"domain_scores_codex":[0.9998409,0.00003179383,0.00001187075,0.00005062772,0.0000241772,0.00004062353],"domain_scores_gemma":[0.9997825,0.0000260771,0.00006094011,0.00003236597,0.00002905905,0.00006912581],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00520672,0.0002304241,0.3568529,0.0002600129,0.0003659503,0.0007324109,0.0004065627,0.0004864689,0.610367,0.0003828579,0.003161094,0.0215477],"study_design_scores_gemma":[0.00002987181,0.0005774695,0.9819909,0.00002174599,0.00006078322,0.0009263992,0.0002761896,0.0005577423,0.01235014,0.0003341206,0.002862007,0.00001259043],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948567,0.001011887,0.0008173398,0.0001465926,0.00002659969,0.00001735248,0.002459737,0.00002498462,0.0006388945],"genre_scores_gemma":[0.9935203,0.0004340564,0.0009601078,0.0001646966,0.00003363217,0.00003057537,0.004075822,0.00001705509,0.0007637219],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00180073,"threshold_uncertainty_score":0.006024003,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02297490744016548,"score_gpt":0.309740405072145,"score_spread":0.2867654976319794,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}