{"id":"W4380423302","doi":"10.1128/aem.00456-23","title":"Socializing at the Air-Liquid Interface: a Functional Genomic Analysis on Biofilm-Related Genes during Pellicle Formation by Escherichia coli and Its Interaction with Aeromonas australiensis","year":2023,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Alberta","funders":"Mitacs; Canada Research Chairs; Results Driven Agriculture Research","keywords":"Biofilm; Bacteria; Interface (matter); Microbiology; Solid surface; Escherichia coli; Biology; Aeromonas; Chemistry; Gene; Genetics; Chemical physics; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001327921,0.0003049504,0.0003598481,0.0004893405,0.0002460402,0.0004128641,0.0001560044,0.0002661529,0.0007425559],"category_scores_gemma":[0.0003063275,0.0001684859,0.0005265363,0.0004043695,0.0002936353,0.00022064,0.0004403315,0.0004693841,0.0003375883],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002607022,"about_ca_system_score_gemma":0.0004053195,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003087755,"about_ca_topic_score_gemma":0.002581261,"domain_scores_codex":[0.9997692,0.00002533488,0.00001018869,0.0000723855,0.00006073281,0.00006219689],"domain_scores_gemma":[0.9997887,0.00005097059,0.00005336061,0.00001254952,0.00004567423,0.00004878932],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000733654,0.00003450873,0.001971584,0.00002376931,0.000005228207,0.00003499142,0.0001286282,0.00002576088,0.9958835,0.00003283999,0.00001367807,0.001772132],"study_design_scores_gemma":[0.00001801889,0.0009592804,0.4634539,0.00002751475,0.0001196879,0.0006816435,0.001723973,0.001921208,0.5278208,0.000273406,0.002949271,0.00005131371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967212,0.0003562915,0.001506683,0.00006545582,0.000006629239,0.00002925984,0.0006524705,0.00001780157,0.0006441378],"genre_scores_gemma":[0.9914793,0.0003887963,0.003721444,0.00009826026,0.00001216162,0.00007704832,0.002056409,0.00002855498,0.002137965],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003087755,"threshold_uncertainty_score":0.006139576,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006158281599125422,"score_gpt":0.1903625891275716,"score_spread":0.1842043075284462,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}