{"id":"W4380570760","doi":"10.1111/tan.15125","title":"Discovery of three novel <scp>HLA‐DPA1</scp> alleles, <i>HLA‐DPA1*01:147N</i>, <i>01:03:47</i>, and <i>02:106</i> using next‐generation sequencing","year":2023,"lang":"en","type":"article","venue":"HLA","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Human leukocyte antigen; Allele; Biology; Genetics; Null allele; DNA sequencing; Gene; Computational biology; Antigen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001355493,0.0002575795,0.0001634261,0.0002588515,0.0001972012,0.0003474087,0.0002730947,0.0005270645,0.0006978026],"category_scores_gemma":[0.0003924052,0.0001263079,0.0003093338,0.0002324677,0.0002046721,0.00009637415,0.0001905208,0.0006589897,0.0002303654],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001876839,"about_ca_system_score_gemma":0.0001831805,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006655406,"about_ca_topic_score_gemma":0.001161493,"domain_scores_codex":[0.9998808,0.00001416397,0.00001107402,0.00003368265,0.00004014573,0.00002011762],"domain_scores_gemma":[0.9997858,0.00006329723,0.00005249557,0.00002304673,0.00003003012,0.00004531006],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001184635,0.00004314906,0.007248819,0.00003271656,0.00003038542,0.001579462,0.00008248988,0.0001307424,0.984519,0.0002409962,0.0002197344,0.005754039],"study_design_scores_gemma":[0.0001287743,0.0005561529,0.2163431,0.00004278302,0.0002577672,0.03711439,0.0003774608,0.007100359,0.7202771,0.0009191027,0.01681556,0.00006746176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948777,0.0003104994,0.002956043,0.0001356236,0.00003561582,0.00003332164,0.000783256,0.00002666067,0.0008412933],"genre_scores_gemma":[0.9927504,0.0002172452,0.004774551,0.0001772926,0.00001862993,0.0000255069,0.001225999,0.00002071522,0.00078975],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006978026,"threshold_uncertainty_score":0.002334356,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07355087604036811,"score_gpt":0.2503229853176778,"score_spread":0.1767721092773097,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}