{"id":"W4380681072","doi":"10.3389/fmicb.2023.1205389","title":"Stenotrophomonas maltophilia natural history and evolution in the airways of adults with cystic fibrosis","year":2023,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Infections and bacterial resistance","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; Alberta Health Services; University of Calgary","funders":"Alberta Precision Laboratories; Cystic Fibrosis Foundation","keywords":"Stenotrophomonas maltophilia; Cystic fibrosis; Natural history; Stenotrophomonas; Microbiology; Medicine; Biology; Pseudomonas aeruginosa; Bacteria; Pseudomonas; Genetics; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003598323,0.0002510718,0.0002642633,0.0007694535,0.0009863781,0.0006694844,0.0005015802,0.000454528,0.001112391],"category_scores_gemma":[0.001546845,0.0001929227,0.0002967015,0.000997292,0.0005649167,0.0004363286,0.0004433845,0.0004301868,0.0001182293],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001889077,"about_ca_system_score_gemma":0.001741886,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.3840309,"about_ca_topic_score_gemma":0.3405736,"domain_scores_codex":[0.9996219,0.00002757501,0.0000212301,0.00009702868,0.00009001963,0.0001423422],"domain_scores_gemma":[0.9991174,0.0000667777,0.0002873159,0.00003753678,0.0002308287,0.0002601906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003316288,0.000006644269,0.9986942,0.000003857731,0.000006518137,0.0001071714,0.0001249349,0.00001352947,0.0002260851,0.000005949202,0.00004533031,0.0007326973],"study_design_scores_gemma":[7.256978e-7,0.0000244622,0.9994758,0.00000342392,0.000003345422,0.0002010295,0.0001810926,0.00003850846,0.00001603681,0.000004650557,0.00004961182,0.000001386904],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993551,0.0001551937,0.00002682961,0.00003480168,0.00000157132,0.000007779789,0.0002276953,0.000001895262,0.0001891856],"genre_scores_gemma":[0.9996051,0.00008983305,0.00004003634,0.00001289585,0.000002320516,0.000003390936,0.0001956027,8.271658e-7,0.00005013461],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3840309,"threshold_uncertainty_score":0.7635913,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002568493599822917,"score_gpt":0.1759672086260376,"score_spread":0.1733987150262147,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}