{"id":"W4380682409","doi":"10.3390/cancers15123178","title":"Differences in the Tumor Microenvironment of EBV-Associated Gastric Cancers Revealed Using Single-Cell Transcriptome Analysis","year":2023,"lang":"en","type":"article","venue":"Cancers","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lawson Health Research Institute; McGill University; McGill University Health Centre; Western University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transcriptome; Immune system; Tumor microenvironment; Phenotype; Cancer research; Carcinogenesis; Cell; Epstein–Barr virus; T cell; Single-cell analysis; CD8; Stroma; Virus; Gene; Immunology; Gene expression; Immunohistochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001431368,0.0001114646,0.0003102687,0.0004766081,0.0001758564,0.0005159444,0.0000827044,0.0001592977,0.0005245968],"category_scores_gemma":[0.0002368063,0.00009416205,0.0002098451,0.0004718038,0.0001426393,0.0001946904,0.0002401002,0.0002218157,0.0002228925],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001231798,"about_ca_system_score_gemma":0.000120608,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003997049,"about_ca_topic_score_gemma":0.0007293611,"domain_scores_codex":[0.999891,0.00001022443,0.000007346927,0.00004235747,0.00002688246,0.00002203031],"domain_scores_gemma":[0.999923,0.00002274562,0.00001735105,0.000008842521,0.00001745588,0.0000106258],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001762399,0.00001316209,0.01661568,0.0001147581,0.00004108577,0.00009154881,0.0001938582,0.0002424797,0.9745155,0.00007178858,0.00009332463,0.007830611],"study_design_scores_gemma":[0.00001402966,0.0003947396,0.7418732,0.00005305645,0.000275479,0.001219417,0.001340379,0.0115138,0.2339389,0.0006274481,0.008707994,0.00004155039],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923463,0.00145,0.003703004,0.00002906115,0.0000129673,0.00001861926,0.001768708,0.00004797089,0.000623275],"genre_scores_gemma":[0.9899998,0.001084734,0.004577468,0.00005050736,0.00001557272,0.00006088645,0.003399157,0.00002983788,0.0007819642],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005245968,"threshold_uncertainty_score":0.001754999,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03026010474411441,"score_gpt":0.2527168224902835,"score_spread":0.2224567177461691,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}