{"id":"W4381248183","doi":"10.1128/spectrum.00614-23","title":"Birth Mode Does Not Determine the Presence of Shared Bacterial Strains between the Maternal Vaginal Microbiome and the Infant Stool Microbiome","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Women's Health Research Institute; University of British Columbia; University of Saskatchewan","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Microbiome; Dysbiosis; Biology; Vaginal delivery; Human microbiome; Transmission (telecommunications); Pregnancy; Obstetrics; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007074471,0.0003245862,0.0004383743,0.0005976785,0.0003198473,0.0008567587,0.0004650014,0.0005260973,0.004692373],"category_scores_gemma":[0.005501523,0.000224687,0.0003400117,0.0005241393,0.0005289015,0.0004852495,0.0006898866,0.0007459103,0.0008462113],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002105642,"about_ca_system_score_gemma":0.0003155407,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001505804,"about_ca_topic_score_gemma":0.001651154,"domain_scores_codex":[0.9991245,0.0002288185,0.00006622666,0.0002194637,0.0002140136,0.0001470243],"domain_scores_gemma":[0.9971884,0.0009138586,0.001033119,0.0003044838,0.0001560364,0.0004040604],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001092849,0.00009397582,0.9084006,0.0001898511,0.0001930901,0.0011612,0.0008373035,0.00008756829,0.06084442,0.000558006,0.0005116957,0.02602946],"study_design_scores_gemma":[0.000004085901,0.0002704221,0.9927984,0.00007084634,0.0000492627,0.00157434,0.0003456162,0.0001449966,0.00348437,0.0003028425,0.000943174,0.0000116407],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9918424,0.002361311,0.001700232,0.0003438055,0.00008177164,0.00001349554,0.0005856277,0.00002531204,0.003046017],"genre_scores_gemma":[0.9975306,0.0006888529,0.0007691902,0.00008374836,0.0000151937,0.00001155585,0.0001912235,0.00002028081,0.0006893914],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004692373,"threshold_uncertainty_score":0.01569754,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009205457251624078,"score_gpt":0.2486739440006466,"score_spread":0.2394684867490225,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}