{"id":"W4381251794","doi":"10.3390/antibiotics12061069","title":"Staphylococcus aureus Small-Colony Variants from Airways of Adult Cystic Fibrosis Patients as Precursors of Adaptive Antibiotic-Resistant Mutations","year":2023,"lang":"en","type":"article","venue":"Antibiotics","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada","keywords":"Microbiology; Staphylococcus aureus; Ciprofloxacin; Vancomycin; Biology; Antibiotics; Cystic fibrosis; Rifampicin; Gentamicin; Antibiotic resistance; Aminoglycoside; Genotyping; Tobramycin; Biofilm; Methicillin-resistant Staphylococcus aureus; Genotype; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001339484,0.0002649975,0.0002974878,0.0004972173,0.0002639866,0.0004574408,0.0001513662,0.0003572806,0.001143552],"category_scores_gemma":[0.0009529128,0.0001686167,0.0001710474,0.000281346,0.00019834,0.0001823115,0.0002560084,0.0003155939,0.0002147749],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001229013,"about_ca_system_score_gemma":0.0001067878,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001552167,"about_ca_topic_score_gemma":0.001328163,"domain_scores_codex":[0.9997672,0.00002967829,0.00003056798,0.00007149573,0.00005157129,0.00004951873],"domain_scores_gemma":[0.9996023,0.00008384741,0.0001204741,0.00003436021,0.0000638413,0.00009522201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001062657,0.0001594778,0.7634847,0.00007170645,0.00005424086,0.008972729,0.001355575,0.0001119237,0.2074022,0.0001379431,0.0003196515,0.01686723],"study_design_scores_gemma":[0.00001687614,0.0005198751,0.973154,0.00001622143,0.00003126329,0.01673744,0.0006036324,0.0003234076,0.007655969,0.00006456547,0.0008666217,0.00001013884],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995379,0.0001572221,0.00008558865,0.00000841576,0.000002378401,0.000007444752,0.00005944756,0.000002408232,0.0001392277],"genre_scores_gemma":[0.9995433,0.00006038117,0.0001139654,0.00001360476,0.000004485356,0.000004542268,0.0001388341,0.000002574631,0.0001181615],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001552167,"threshold_uncertainty_score":0.003825545,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01670275771227823,"score_gpt":0.2812054295897775,"score_spread":0.2645026718774993,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}