{"id":"W4381715933","doi":"10.1111/jbg.12813","title":"Genome‐wide association studies for epistatic genetic effects on fertility and reproduction traits in Holstein cattle","year":2023,"lang":"en","type":"article","venue":"Journal of Animal Breeding and Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Bayer (Canada)","funders":"Agriculture and Agri-Food Canada; Dairy Farmers of Canada","keywords":"Biology; Epistasis; Single-nucleotide polymorphism; Genetics; Genome-wide association study; Genetic architecture; Quantitative trait locus; SNP; Population; Genotype; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001760837,0.0002605799,0.0003359703,0.001110714,0.0003461257,0.0004935643,0.0003303231,0.0002610155,0.001867091],"category_scores_gemma":[0.001741107,0.0001281014,0.0007790353,0.001315117,0.0003106164,0.0001598651,0.0003133875,0.0003770647,0.00008000801],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001953684,"about_ca_system_score_gemma":0.0002323213,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005482503,"about_ca_topic_score_gemma":0.007132587,"domain_scores_codex":[0.9990822,0.0003872305,0.00006231642,0.0002485585,0.0001272117,0.00009248056],"domain_scores_gemma":[0.9980634,0.001080583,0.0004626305,0.0001070759,0.0001154409,0.0001709728],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008097613,0.00005338289,0.9803686,0.00003608355,0.001197918,0.0002907737,0.0001461975,0.000241545,0.01122693,0.0000905272,0.0000948641,0.005443399],"study_design_scores_gemma":[0.00001053325,0.00004610342,0.9991416,0.000002591652,0.0001384528,0.00008659598,0.00003739765,0.0002759699,0.0001716101,0.00002335949,0.00006347065,0.000002218604],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988922,0.0003346062,0.000507693,0.00002166964,0.000003300346,0.000001973166,0.0001301595,0.000006772698,0.0001015493],"genre_scores_gemma":[0.9992604,0.00007184597,0.0003970685,0.00001351477,0.000006602461,0.00000389799,0.0001420376,0.00000334613,0.0001013982],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005482503,"threshold_uncertainty_score":0.01090115,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02714493968461959,"score_gpt":0.2872650161135354,"score_spread":0.2601200764289159,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}