{"id":"W4382010927","doi":"10.1128/mra.00186-23","title":"Profiling of the Klebsiella pneumoniae Phosphoproteome under Iron-Limited and Iron-Replete Conditions","year":2023,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Klebsiella pneumoniae; Biology; Bacterial protein; Microbiology; Computational biology; Chemistry; Bacteria; Biochemistry; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001425596,0.0003622444,0.0003205986,0.0004672871,0.0003080763,0.0003996961,0.000188349,0.0002978011,0.0008010131],"category_scores_gemma":[0.0002285014,0.0001764341,0.0002481205,0.0007286859,0.0001400494,0.0003148933,0.0002718844,0.0002963744,0.0003728703],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002111957,"about_ca_system_score_gemma":0.0003295973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002120703,"about_ca_topic_score_gemma":0.003803531,"domain_scores_codex":[0.9998367,0.00001476695,0.00001270146,0.0000353127,0.00006415414,0.00003627718],"domain_scores_gemma":[0.9999058,0.0000138844,0.00002106255,0.00000725766,0.00002958795,0.00002230995],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000145823,0.00001293241,0.0007321415,0.00006938493,0.00000502502,0.00003255289,0.00002597874,0.00004548821,0.9978976,0.00001785497,0.00004864987,0.0009664868],"study_design_scores_gemma":[0.00001203214,0.0003992418,0.1252604,0.00003735735,0.0000457704,0.0005767534,0.0003527889,0.001582097,0.8677931,0.0001135461,0.003797318,0.00002976417],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9866897,0.000972428,0.00212888,0.0001053005,0.00002984918,0.00005423293,0.008359224,0.00007456665,0.00158576],"genre_scores_gemma":[0.9632426,0.002468318,0.01244999,0.0001838557,0.00001533583,0.0001493357,0.01632842,0.00005975902,0.005102338],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002120703,"threshold_uncertainty_score":0.004216671,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01018627028573662,"score_gpt":0.2293918975058814,"score_spread":0.2192056272201447,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}