{"id":"W4382199189","doi":"10.1093/jnci/djad122","title":"Circulating proteome for pulmonary nodule malignancy","year":2023,"lang":"en","type":"article","venue":"JNCI Journal of the National Cancer Institute","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; BC Cancer Agency; Public Health Ontario; University of Toronto; Lunenfeld-Tanenbaum Research Institute","funders":"Instituto de Salud Carlos III; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; European Regional Development Fund; World Health Organization","keywords":"Malignancy; Proteome; Nodule (geology); Pathology; Solitary pulmonary nodule; Medicine; Biology; Computational biology; Lung; Internal medicine; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001112528,0.0003816465,0.0003077463,0.001158917,0.0002965508,0.0009190518,0.0003236999,0.0004894348,0.001726205],"category_scores_gemma":[0.004495865,0.0001896525,0.0004058923,0.001124839,0.0003815379,0.0004854424,0.0006196659,0.0006380305,0.0003031514],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004068011,"about_ca_system_score_gemma":0.0003794305,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001106959,"about_ca_topic_score_gemma":0.0009450936,"domain_scores_codex":[0.9994746,0.0001668326,0.00005409601,0.0001355243,0.0001187918,0.00005024983],"domain_scores_gemma":[0.9959849,0.001034579,0.002255708,0.0001683032,0.0002900125,0.0002664044],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002103696,0.00002311561,0.9897519,0.0000524558,0.00008510576,0.0001291825,0.00004851595,0.0002760974,0.002687348,0.00007858006,0.0002142572,0.006443042],"study_design_scores_gemma":[0.00001052528,0.0001333602,0.9932061,0.00003546887,0.0001531585,0.0009678524,0.0001031019,0.002396232,0.001561077,0.000573869,0.0008500029,0.000009301268],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992023,0.004273431,0.001919935,0.0003783149,0.00002158236,0.00001756952,0.0004447099,0.00004030835,0.0008810512],"genre_scores_gemma":[0.9982907,0.0003396174,0.001014857,0.00004419157,0.00002534364,0.000005394855,0.0002066838,0.000003211161,0.00007002655],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001726205,"threshold_uncertainty_score":0.005883694,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08641009852334319,"score_gpt":0.3825019639833421,"score_spread":0.2960918654599989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}