{"id":"W4382631886","doi":"10.1016/j.virusres.2023.199165","title":"MQM1, a bacteriophage infecting strains of Aeromonas salmonicida subspecies salmonicida carrying Prophage 3","year":2023,"lang":"en","type":"article","venue":"Virus Research","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation","keywords":"Prophage; Aeromonas salmonicida; Biology; Bacteriophage; Microbiology; Genome; Virulence; Phage therapy; Gene; Genetics; Virology; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001278746,0.0002145324,0.000291035,0.0003120954,0.0005350744,0.0001455656,0.0005179893,0.0001300704,0.005343828],"category_scores_gemma":[0.0002536365,0.0002022534,0.0001536481,0.001895809,0.0004709385,0.000456837,0.0008833599,0.0006928433,0.002971509],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004680154,"about_ca_system_score_gemma":0.00006329185,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009436824,"about_ca_topic_score_gemma":0.004191882,"domain_scores_codex":[0.9971026,0.0002712417,0.0004520231,0.0005351182,0.0006753238,0.0009637077],"domain_scores_gemma":[0.9988592,0.0002516407,0.0001143727,0.0005276146,0.00006396277,0.0001832394],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002511749,0.0001006613,0.003062073,0.00004134792,0.00002340881,0.00009668763,0.001644869,0.00008604327,0.9827217,0.00003177495,0.001178812,0.01098743],"study_design_scores_gemma":[0.000423513,0.0002978038,0.5226973,0.0001016841,0.00001283136,0.0000415129,0.001197434,0.0003065974,0.453371,0.00009732151,0.02111145,0.0003415383],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9839831,0.00005500241,0.00001360698,0.0001662441,0.0002107295,0.0004742865,0.00006813646,0.0001412219,0.01488768],"genre_scores_gemma":[0.9948524,0.0001539804,0.000175757,0.00002341088,0.0000972405,0.00006011632,0.00002351936,0.00005111527,0.004562492],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5293508,"threshold_uncertainty_score":0.9978048,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09624637223043976,"score_gpt":0.3794670447443716,"score_spread":0.2832206725139318,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}