{"id":"W4382775188","doi":"10.3390/microorganisms11071709","title":"A Tale about Shigella: Evolution, Plasmid, and Virulence","year":2023,"lang":"en","type":"review","venue":"Microorganisms","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Cégep de l'Outaouais; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Ottawa","keywords":"Shigella; Biology; Plasmid; Virulence; Secretion; Gene; Genetics; Microbiology; Type three secretion system; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002532346,0.0004115333,0.0007373278,0.00009191549,0.0001983933,0.00006658752,0.0004027871,0.0003522842,0.00001731462],"category_scores_gemma":[0.0002346219,0.000361793,0.00018762,0.0003066048,0.0002648819,0.000002778199,0.0008873424,0.0002875111,0.0003221769],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006400236,"about_ca_system_score_gemma":0.0003777783,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002560017,"about_ca_topic_score_gemma":0.00004819103,"domain_scores_codex":[0.9981642,0.0001246643,0.0003493094,0.0007187544,0.0001762706,0.0004667803],"domain_scores_gemma":[0.9991272,0.00004668251,0.0001427369,0.0004711516,0.00008906419,0.0001231548],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006207979,0.0003294333,0.0002281063,0.06841747,0.003811799,0.0002059642,0.0003593203,0.000001723846,0.2239876,0.0009664954,0.1171302,0.5844998],"study_design_scores_gemma":[0.0001242673,0.00009390747,0.00003955861,0.001351397,0.0001323003,0.00004696647,0.00002246556,6.108646e-7,0.0007637669,0.00004779303,0.9969894,0.0003875147],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0005484425,0.9980961,0.0001091839,0.00002219077,0.0001581903,0.0005270554,0.0001508662,0.00004938828,0.0003386011],"genre_scores_gemma":[0.00006964635,0.9941843,0.0003092717,0.00004264071,0.0003099665,0.0001229817,0.0001541811,0.0001133118,0.004693686],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8798592,"threshold_uncertainty_score":0.9998834,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.030079583968212,"score_gpt":0.3295690376008489,"score_spread":0.2994894536326369,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}