{"id":"W4382862307","doi":"10.5943/mycosphere/si/1f/5","title":"Comparative genomics provides new insights into the evolution of Colletotrichum","year":2023,"lang":"en","type":"article","venue":"Mycosphere","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"University of Electronic Science and Technology of China; Zhejiang University","keywords":"Biology; Genomics; Comparative genomics; Colletotrichum; Evolutionary biology; Computational biology; Genetics; Botany; Genome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004533815,0.00008603615,0.0001093635,0.00001329978,0.00008693156,0.00001086429,0.0001477201,0.00005936456,0.00001622203],"category_scores_gemma":[0.00003272737,0.00006040101,0.00006240849,0.000204594,0.00004663712,0.000002382898,0.00007853992,0.00003645513,0.00004654691],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002354198,"about_ca_system_score_gemma":0.0002088343,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001491772,"about_ca_topic_score_gemma":0.0002708228,"domain_scores_codex":[0.9994863,0.00003792337,0.0001220654,0.0001582898,0.00008089185,0.0001145745],"domain_scores_gemma":[0.9996303,0.00001977153,0.00005976484,0.0001905128,0.00004913481,0.00005054006],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007916839,0.00002498189,0.001346337,0.00001564071,0.00004956379,0.000002711676,0.000540143,0.0005094615,0.9503825,0.0003270689,0.04621458,0.0005078101],"study_design_scores_gemma":[0.001353211,0.0007715325,0.144504,0.00006144444,0.0001432332,0.00001035416,0.008484166,0.004010868,0.2475757,0.003467663,0.5889816,0.0006361741],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920846,0.005048975,0.0002867503,0.00006462214,0.00007737485,0.0001937748,0.00006224243,0.00001546256,0.002166166],"genre_scores_gemma":[0.9966018,0.0003023904,0.0001762025,0.00004915309,0.0001266801,0.00001220254,0.0001298944,0.000007670947,0.002594006],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7028068,"threshold_uncertainty_score":0.2463081,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01292490694330761,"score_gpt":0.2347786010643819,"score_spread":0.2218536941210743,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}