{"id":"W4383069749","doi":"10.3389/fgene.2023.1197933","title":"Impact of Plasmodium falciparum infection on DNA methylation of circulating immune cells","year":2023,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"York University; New York University Abu Dhabi","keywords":"DNA methylation; Biology; Epigenetics; Immune system; Plasmodium falciparum; Methylation; Malaria; Differentially methylated regions; Immunology; CpG site; Genetics; Gene; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001541651,0.0001066622,0.000152207,0.0001394796,0.0001744277,0.0002052892,0.00007279746,0.000111325,0.001242826],"category_scores_gemma":[0.0005085241,0.00009060554,0.00004736197,0.0001603295,0.0001441831,0.0001003225,0.0001491754,0.0001607962,0.000112404],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002040509,"about_ca_system_score_gemma":0.0001693605,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004427192,"about_ca_topic_score_gemma":0.00534108,"domain_scores_codex":[0.9998943,0.00002226826,0.000004795593,0.00003318354,0.00001906309,0.00002638965],"domain_scores_gemma":[0.9998364,0.00004170486,0.00006190181,0.00001050691,0.00002426152,0.00002512367],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001147483,0.00003758796,0.2914211,0.00008850631,0.00006622195,0.0002105125,0.0006568014,0.0002744588,0.6885325,0.0001712792,0.0002114574,0.01718216],"study_design_scores_gemma":[0.000006243435,0.0002782717,0.9486321,0.000007916405,0.00002510342,0.0003808847,0.0002276097,0.0004486709,0.0486167,0.00008694059,0.001284002,0.000005683855],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985598,0.0004210039,0.0002964565,0.00002942787,0.000002456183,0.000002701292,0.000311125,0.000005879061,0.0003711406],"genre_scores_gemma":[0.9991102,0.0001390511,0.0002036321,0.0000117578,0.000001846172,0.000003237521,0.0001493521,0.00000289898,0.0003778563],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004427192,"threshold_uncertainty_score":0.008802831,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01553355641622956,"score_gpt":0.2858091033234135,"score_spread":0.2702755469071839,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}