{"id":"W4383558810","doi":"10.1016/j.cellsig.2023.110798","title":"SARS-CoV-2 vaccine breakthrough infections (VBI) by Omicron variant (B.1.1.529) and consequences in structural and functional impact","year":2023,"lang":"en","type":"article","venue":"Cellular Signalling","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Infectivity; Mutagenesis; Virology; Mutation; Mutant; Wild type; Biology; Chemistry; Genetics; Virus; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004393617,0.0002320487,0.0003510182,0.0003317708,0.0001924046,0.00009647229,0.00006573341,0.0001497852,0.00003057687],"category_scores_gemma":[0.0001001715,0.000197105,0.00007862127,0.0006095815,0.0001574984,0.0001758658,0.00007991723,0.0003963458,0.00003154899],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000120095,"about_ca_system_score_gemma":0.0002106379,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001464034,"about_ca_topic_score_gemma":0.0001374608,"domain_scores_codex":[0.998411,0.00007974274,0.000321963,0.000455398,0.0002777416,0.0004541837],"domain_scores_gemma":[0.9994001,0.0002372217,0.0000638483,0.0001628174,0.00008046231,0.0000555659],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001682802,0.00003413409,0.04397377,0.00008155081,0.00008385435,0.0002536711,0.0002334506,0.0000173668,0.9538534,0.0001032535,0.0005744011,0.0006228253],"study_design_scores_gemma":[0.003513998,0.0004960305,0.01831345,0.000178852,0.00009060433,0.0006006706,0.0002543517,0.01372774,0.9556981,0.001930701,0.004806624,0.000388911],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955706,0.002144441,0.00105142,0.0004453595,0.0001274311,0.0003396233,0.00002301042,0.0001000233,0.0001980934],"genre_scores_gemma":[0.9978797,0.00006599536,0.00006970749,0.001709789,0.0001472124,0.00002106497,0.00004786021,0.00003060406,0.00002807381],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02566031,"threshold_uncertainty_score":0.8037707,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04056904389461571,"score_gpt":0.329233321391889,"score_spread":0.2886642774972733,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}