{"id":"W4383753373","doi":"10.1073/pnas.2301302120","title":"Identification of a second glycoform of the clinically prevalent O1 antigen from <i>Klebsiella pneumoniae</i>","year":2023,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Guelph","funders":"Canadian Glycomics Network; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Klebsiella pneumoniae; Glycan; Microbiology; Klebsiella; Antigen; Biology; Bacteria; Gene; Carbohydrate conformation; Monoclonal antibody; Polysaccharide; Antibody; Enterobacteriaceae; Biochemistry; Glycoprotein; Escherichia coli; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001029939,0.0005677392,0.0001783864,0.0001754715,0.00012256,0.000308204,0.0001476348,0.0003077522,0.0006158187],"category_scores_gemma":[0.0002418945,0.0001136311,0.0003505988,0.0001869479,0.0001507738,0.0001508787,0.0002882663,0.0004282971,0.0002870423],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002281051,"about_ca_system_score_gemma":0.0001934628,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008628668,"about_ca_topic_score_gemma":0.0006991776,"domain_scores_codex":[0.9998927,0.00001505619,0.000008896481,0.00003227445,0.00002140225,0.00002952215],"domain_scores_gemma":[0.9998263,0.00002144458,0.00005859669,0.00001734729,0.00002758362,0.00004884055],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008616346,0.00001122477,0.001190765,0.00003251612,0.000004795176,0.00007885222,0.00001929252,0.00001888564,0.9974874,0.00002434193,0.00002769272,0.001018016],"study_design_scores_gemma":[0.00001491693,0.0005643663,0.08802547,0.00002654852,0.00006653821,0.002885701,0.0001610453,0.0008495073,0.9021804,0.00009036045,0.005119297,0.00001583396],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966167,0.0004260092,0.001749988,0.00008983703,0.00001826339,0.00002472895,0.0004801305,0.00001799519,0.0005762736],"genre_scores_gemma":[0.9910688,0.0003983363,0.00497713,0.00009941082,0.00001449228,0.00001774737,0.002320679,0.00001994318,0.001083342],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008628668,"threshold_uncertainty_score":0.002060056,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03960326704128817,"score_gpt":0.3442197478118098,"score_spread":0.3046164807705216,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}