{"id":"W4383815012","doi":"10.1016/j.ccell.2023.06.006","title":"Tumor monocyte content predicts immunochemotherapy outcomes in esophageal adenocarcinoma","year":2023,"lang":"en","type":"article","venue":"Cancer Cell","topic":"Esophageal Cancer Research and Treatment","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Cancer Research UK; National Institute for Health and Care Research; Ludwig Institute for Cancer Research; AstraZeneca","keywords":"Medicine; Esophageal cancer; Oncology; Internal medicine; Transcriptome; Adenocarcinoma; Cancer research; Cancer; Biology; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001396856,0.0002179963,0.0004270711,0.0001457996,0.00005149601,0.00002039365,0.0001451539,0.00005750608,0.0006528727],"category_scores_gemma":[0.00001717991,0.0001732462,0.000139867,0.0003477082,0.00006623867,0.00008697912,0.00005682482,0.0002181533,0.0002547475],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007329109,"about_ca_system_score_gemma":0.0003215551,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002193023,"about_ca_topic_score_gemma":0.0002321424,"domain_scores_codex":[0.998329,0.00003695056,0.0002762963,0.0003815611,0.0003874445,0.0005887329],"domain_scores_gemma":[0.9991868,0.00005910324,0.00005642329,0.0003786016,0.0000628676,0.0002562043],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007535585,0.0002908775,0.9857368,0.0002034319,0.0001534301,0.002270096,0.0006248019,0.00002192213,0.002074419,0.00002490623,0.002514447,0.005331338],"study_design_scores_gemma":[0.007418629,0.0005475187,0.9443226,0.0000829379,0.00003504491,0.00001075428,0.0002371138,0.0002429417,0.04642534,0.00004742966,0.0004962108,0.0001334603],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.951409,0.0442251,0.000003679485,0.001296479,0.0002459219,0.0009052901,0.00005687748,0.0001586091,0.001698976],"genre_scores_gemma":[0.9835982,0.002893743,0.00006067508,0.0008187493,0.0001316442,0.0004866209,0.00004280375,0.00004781091,0.01191979],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04435092,"threshold_uncertainty_score":0.7148498,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05749230030295237,"score_gpt":0.3312822433363458,"score_spread":0.2737899430333934,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}