{"id":"W4383999393","doi":"10.1176/appi.ajp.20220304","title":"Subcortical Brain Alterations in Carriers of Genomic Copy Number Variants","year":2023,"lang":"en","type":"article","venue":"American Journal of Psychiatry","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of Mental Health; Institut de Valorisation des Données; Centre Hospitalier Universitaire Vaudois; National Institutes of Health; Canada First Research Excellence Fund; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Norges Forskningsråd; Simons Foundation Autism Research Initiative; Canadian Institutes of Health Research; National Science Foundation; Compute Canada; Wellcome Trust; Eunice Kennedy Shriver National Institute of Child Health and Human Development; European Commission; Fondation Brain Canada; Helse Sør-Øst RHF; Biogen; Health and Care Research Wales","keywords":"Biology; Genetics; Copy-number variation; Computational biology; Neuroscience; Genome; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002148729,0.00007867182,0.0001799765,0.00008395151,0.00003183199,0.000009219896,0.0001426366,0.0000367397,0.00007033806],"category_scores_gemma":[0.00003408016,0.00007526143,0.00009993526,0.0002069444,0.0001074608,0.000005423376,0.00003027062,0.00008964222,0.00001224074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001147166,"about_ca_system_score_gemma":0.0003167445,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000663484,"about_ca_topic_score_gemma":0.00007683016,"domain_scores_codex":[0.9991547,0.00007293127,0.0004189751,0.0001010719,0.00009409984,0.0001582561],"domain_scores_gemma":[0.9994562,0.0000174266,0.0002513432,0.000139125,0.00006593219,0.00006998812],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002793992,0.0001464381,0.9026923,0.00001968729,0.0001971201,0.00001176239,0.0006706069,0.001258451,0.07972161,0.003283261,0.01050703,0.0012123],"study_design_scores_gemma":[0.0024783,0.001989755,0.9679375,0.00007403285,0.00008837686,0.0004625406,0.01222893,0.0001523749,0.006706886,0.002769393,0.00465266,0.0004592375],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972596,0.00006536502,0.0005681074,0.00126536,0.0003823999,0.00003726154,0.00002442791,0.000002483707,0.0003950024],"genre_scores_gemma":[0.9958911,0.00006890356,0.003429009,0.0002256118,0.0002391101,0.000002021119,0.00001468559,0.00001191355,0.0001176263],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07301473,"threshold_uncertainty_score":0.3069072,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005260095751136768,"score_gpt":0.2533844484916645,"score_spread":0.2481243527405277,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}