{"id":"W4384695846","doi":"10.1101/2023.07.16.549116","title":"Cell networks in the mouse liver during partial hepatectomy","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Liver physiology and pathology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia; University of Toronto","funders":"National Institutes of Health; Oregon Health and Science University","keywords":"Autocrine signalling; Liver regeneration; Paracrine signalling; Regeneration (biology); Cell biology; Biology; Cell; Multicellular organism; Cell type; Liver cell; Homeostasis; Transcriptome; Hepatic stellate cell; Receptor; Gene expression; Genetics; Internal medicine; Endocrinology; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001058797,0.0001492318,0.000188398,0.0004810223,0.0001648468,0.0002543462,0.0001148897,0.0001549211,0.001031494],"category_scores_gemma":[0.0001088204,0.0001629033,0.0002606366,0.0003465877,0.0001782584,0.0001565829,0.0001877263,0.0002736718,0.0002939202],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002655261,"about_ca_system_score_gemma":0.0001504421,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001416293,"about_ca_topic_score_gemma":0.001734402,"domain_scores_codex":[0.9999079,0.000008856591,0.000003951789,0.00003031799,0.00003335673,0.00001565741],"domain_scores_gemma":[0.9999318,0.00001678299,0.00001797805,0.000009195296,0.000009873847,0.00001427693],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002212876,0.00001521387,0.00564967,0.00005720406,0.00003020744,0.0001057198,0.00006687054,0.005797266,0.9822184,0.0005943872,0.0001845436,0.005059224],"study_design_scores_gemma":[0.0000338447,0.000258484,0.2226654,0.00002163752,0.0001088973,0.0004689171,0.0002413165,0.09316142,0.6745314,0.002168704,0.006306368,0.0000336671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9890815,0.0003028362,0.007483203,0.00003349682,0.00000662609,0.000009238786,0.001935994,0.0002121602,0.0009350227],"genre_scores_gemma":[0.9865977,0.0002850516,0.007011457,0.0000483664,0.0000036045,0.00005796932,0.00387224,0.00007114305,0.002052411],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001416293,"threshold_uncertainty_score":0.003450692,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0215032641888539,"score_gpt":0.2268615178093457,"score_spread":0.2053582536204918,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}