{"id":"W4384828887","doi":"10.1101/2023.07.18.549600","title":"Joint effects of balancing selection and population bottlenecks on the evolution of a regulatory region of human anti-viral <i>APOBEC3</i>","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Research Organization of Information and Systems","keywords":"Diversification (marketing strategy); Pandemic; Haplogroup; Coronavirus disease 2019 (COVID-19); Virology; Biology; Geography; Genetics; Gene; Genotype; Haplotype; Business; Medicine; Infectious disease (medical specialty)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008951272,0.0002299066,0.0003367622,0.0002351784,0.0004467046,0.0004631686,0.0003896809,0.0003543666,0.001279871],"category_scores_gemma":[0.001609451,0.0001500416,0.000457792,0.0001743462,0.0005084443,0.0004113576,0.000382604,0.0004979247,0.0001016299],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004488978,"about_ca_system_score_gemma":0.0004726735,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003562056,"about_ca_topic_score_gemma":0.002486194,"domain_scores_codex":[0.999878,0.00005164089,0.00000465404,0.00002708912,0.00001423338,0.00002432822],"domain_scores_gemma":[0.9995851,0.0002233067,0.00007718347,0.00002639845,0.00002882491,0.00005918629],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007350517,0.000182231,0.1261976,0.0001424122,0.000495792,0.001065633,0.0004719195,0.7637548,0.08021083,0.01266959,0.0007013812,0.01337279],"study_design_scores_gemma":[0.0001002826,0.0003338233,0.0368192,0.00001822986,0.0001194445,0.0002222231,0.0001654466,0.952504,0.004333002,0.004611071,0.0007381035,0.00003516707],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965966,0.00004866389,0.002883941,0.00003547217,0.000006288918,0.000005353434,0.00003760841,0.00002266061,0.0003633647],"genre_scores_gemma":[0.9990925,0.00002852925,0.000676635,0.00001272803,0.000002235319,0.000006912782,0.00004470565,0.000006287452,0.0001294649],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003562056,"threshold_uncertainty_score":0.007082641,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01662047029147765,"score_gpt":0.2392180305899871,"score_spread":0.2225975602985095,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}