{"id":"W4385067839","doi":"10.1093/femsml/uqad033","title":"The eukaryome of African children is influenced by geographic location, gut biogeography, and nutritional status","year":2023,"lang":"en","type":"article","venue":"microLife","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Institut Pasteur of Shanghai, Chinese Academy of Sciences; Assistance publique-Hôpitaux de Paris; Total Foundation; Human Frontier Science Program; Université de Lausanne; University of British Columbia; Assistance Publique - Hôpitaux de Paris; Directorate for Biological Sciences; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Universität Basel; Clemson University; Canadian Institute for Advanced Research; L'Oreal USA; National Science Foundation; Howard Hughes Medical Institute","keywords":"Biology; Feces; Blastocystis; Gastrointestinal tract; Zoology; Physiology; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001529717,0.0001086166,0.0001352649,0.0001940172,0.0003866215,0.00001875251,0.0001091834,0.0001113464,0.00004668265],"category_scores_gemma":[0.00009019455,0.00008649212,0.00005811263,0.0006474759,0.0005961813,0.00003913638,0.00005101667,0.0001160525,0.0001270025],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007113262,"about_ca_system_score_gemma":0.00004432661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006408503,"about_ca_topic_score_gemma":0.0000114613,"domain_scores_codex":[0.9991819,0.00006476016,0.0002282261,0.0001742754,0.00003475513,0.000316127],"domain_scores_gemma":[0.9992609,0.0003057676,0.0000812225,0.0001829469,0.0001404443,0.00002869014],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003050477,0.00009129479,0.8532353,0.000009817381,0.0002172192,4.548948e-7,0.0001592025,0.000002525366,0.06773141,0.000760021,0.07709753,0.000664743],"study_design_scores_gemma":[0.0007365986,0.00007872364,0.9302686,0.00001592592,0.0000362626,0.0000259319,0.0001109616,0.000001402992,0.01516442,0.0006328353,0.05281223,0.0001160617],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916076,0.006296664,0.00003064494,0.000649575,0.0001640528,0.0001753492,0.0008507697,0.00005552422,0.0001698251],"genre_scores_gemma":[0.9967629,0.002299038,0.00001605163,0.000299711,0.0000229931,0.00003193959,0.0004253641,0.000008063598,0.0001339435],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07703337,"threshold_uncertainty_score":0.3527046,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004419770752052021,"score_gpt":0.2242843447082635,"score_spread":0.2198645739562115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}