{"id":"W4385071453","doi":"10.1093/gbe/evad135","title":"Phylogenomic Analysis of 155 Helminth Species Reveals Widespread Absence of Oxygen Metabolic Capacity","year":2023,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Helminths; Ecology; Zoology; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002752702,0.0003170424,0.0004896403,0.002098113,0.000514106,0.0005735037,0.0001654195,0.0003056766,0.001000667],"category_scores_gemma":[0.0007133693,0.0001610436,0.0004611271,0.002019292,0.0003184716,0.0002503817,0.0005554884,0.0002774748,0.0003185564],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002480841,"about_ca_system_score_gemma":0.000339609,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001923433,"about_ca_topic_score_gemma":0.002119872,"domain_scores_codex":[0.9996164,0.00004694615,0.00003933009,0.0001445951,0.00007403098,0.00007867206],"domain_scores_gemma":[0.9995219,0.0001246006,0.0001760693,0.00003962336,0.00006053058,0.00007725811],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001074372,0.0001221678,0.487957,0.0008692117,0.0006747101,0.0007638264,0.002051891,0.001017874,0.4680681,0.0003923483,0.0006893085,0.03631916],"study_design_scores_gemma":[0.000008360507,0.0001198957,0.9932333,0.00003517596,0.0001093937,0.0004561279,0.0004303734,0.0005605298,0.002580412,0.0000777489,0.002376564,0.00001215795],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954311,0.0008240454,0.0003330467,0.00002761482,0.000003079479,0.00001306085,0.002780593,0.00002285296,0.0005646133],"genre_scores_gemma":[0.988372,0.0006772103,0.002046719,0.00006391531,0.000005791498,0.00003472434,0.008412741,0.00001725239,0.0003696243],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002098113,"threshold_uncertainty_score":0.003824472,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02618177044170206,"score_gpt":0.2336744675941651,"score_spread":0.2074926971524631,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}