{"id":"W4385154653","doi":"10.1093/gigascience/giad051","title":"A new haplotype-resolved turkey genome to enable turkey genetics and genomics research","year":2022,"lang":"en","type":"article","venue":"GigaScience","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Grand River Hospital","funders":"Southwest University; Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Haplotype; Genomics; Genome; Human genetics; Genetics; Biology; Computational biology; Gene; Allele","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006292651,0.0007686572,0.0008404099,0.001380898,0.0004635763,0.0009643073,0.0008429178,0.0007580876,0.005729801],"category_scores_gemma":[0.001162212,0.0005532807,0.0009304672,0.001454538,0.0001849973,0.0008083782,0.001152062,0.001301873,0.00238979],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006106729,"about_ca_system_score_gemma":0.000836266,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002469565,"about_ca_topic_score_gemma":0.006492039,"domain_scores_codex":[0.9996728,0.00003025876,0.00002458458,0.0001558334,0.00007142512,0.00004523219],"domain_scores_gemma":[0.9992509,0.0001082149,0.0001052107,0.0001470968,0.0002676177,0.0001209112],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001025582,0.0001732715,0.009562895,0.001222178,0.0002784501,0.0009713548,0.0007457636,0.005725807,0.8039407,0.002949132,0.01565767,0.1577473],"study_design_scores_gemma":[0.0004302316,0.001328531,0.168274,0.0006565198,0.001356315,0.004310384,0.0008339697,0.03558866,0.2318452,0.005499108,0.5495911,0.0002860923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.530983,0.006072432,0.3184925,0.001047705,0.001421162,0.0006356396,0.1083886,0.01485913,0.01809995],"genre_scores_gemma":[0.2117495,0.001298298,0.5416371,0.0002627409,0.0001064333,0.0002938674,0.2373959,0.002559159,0.004697181],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005729801,"threshold_uncertainty_score":0.01916808,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02705363351294917,"score_gpt":0.2758492135263816,"score_spread":0.2487955800134324,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}