{"id":"W4385364948","doi":"10.3390/genes14081529","title":"Deep Isolated Aquifer Brines Harbor Atypical Halophilic Microbial Communities in Quebec, Canada","year":2023,"lang":"en","type":"article","venue":"Genes","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre de Géomatique du Québec; Ministère des Ressources naturelles et des Forêts (Québec); Université du Québec à Montréal","funders":"Fonds de recherche du Québec – Nature et technologies; Groupe de recherche interuniversitaire en limnologie; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Halophile; Biogeochemical cycle; Archaea; Biology; Microbial ecology; Aquifer; Ecology; Extremophile; Microbial population biology; Anoxic waters; Groundwater; Microorganism; Bacteria; Geology; Paleontology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001238128,0.0001241033,0.0001749548,0.00004311945,0.0002196459,0.00001224271,0.0004063698,0.0001054303,0.005004378],"category_scores_gemma":[0.00001557289,0.0001251074,0.00002961829,0.0002962864,0.0002365569,0.00006762043,0.0004611602,0.0002273396,0.0005310058],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001353107,"about_ca_system_score_gemma":0.00005710284,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9482451,"about_ca_topic_score_gemma":0.9996465,"domain_scores_codex":[0.9990005,0.0002752283,0.0001796533,0.0001322921,0.00005746216,0.0003549],"domain_scores_gemma":[0.999453,0.0001506036,0.00003179253,0.0003081275,0.000006072067,0.00005041621],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005924419,0.0002916332,0.4650565,0.00005904712,0.00008674549,0.0001744421,0.0055249,0.01478761,0.2536545,0.0002126711,0.251204,0.00835548],"study_design_scores_gemma":[0.0003957297,0.00003887108,0.8711891,0.000009985351,0.000007260248,0.000007512065,0.0004959452,0.001719622,0.001107215,0.0002603485,0.1244707,0.0002977294],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980727,0.00008127571,0.000006145457,0.001033426,0.0002578227,0.0001024367,0.00000915233,0.0000470515,0.0003899456],"genre_scores_gemma":[0.9972817,0.00008013834,0.00002967418,0.0009624367,0.00003646326,0.00001082335,0.0001186905,0.00001149116,0.001468537],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4061325,"threshold_uncertainty_score":0.9959052,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01135457438456185,"score_gpt":0.2063172966977981,"score_spread":0.1949627223132362,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}