{"id":"W4385406155","doi":"10.1093/plcell/koad212","title":"Natural variation in the prolyl 4-hydroxylase gene <i>PtoP4H9</i> contributes to perennial stem growth in <i>Populus</i>","year":2023,"lang":"en","type":"article","venue":"The Plant Cell","topic":"Bioenergy crop production and management","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Project 211; National Institute of Environmental Health Sciences; Peking University; National Key Research and Development Program of China; Higher Education Discipline Innovation Project; Beijing Forestry University; National Natural Science Foundation of China","keywords":"Biology; Perennial plant; Cambium; Stem cell; Genetic variation; Genetic architecture; Gene; Evolutionary biology; Genetics; Quantitative trait locus; Botany; Xylem","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007911298,0.0001026139,0.0001021884,0.00002791475,0.0001356115,0.00006711563,0.0003510036,0.00004086103,0.00001315852],"category_scores_gemma":[0.00001617334,0.00003028526,0.00004121565,0.0007807566,0.00002066944,0.00005029973,0.00009711684,0.0001496212,0.0001010824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002695583,"about_ca_system_score_gemma":0.000004549706,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001031962,"about_ca_topic_score_gemma":0.002678474,"domain_scores_codex":[0.9990066,0.0001350393,0.0001728105,0.0002280983,0.0001670191,0.0002903966],"domain_scores_gemma":[0.9997263,0.0001200568,0.00004248953,0.00006964662,0.0000175187,0.00002401582],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003259731,0.0003292496,0.002576357,0.0000235614,0.00002253961,0.00004573931,0.002595937,0.0004630116,0.9434696,0.00788957,0.03253476,0.009723724],"study_design_scores_gemma":[0.002224938,0.0005493843,0.5391569,0.00007481561,0.00007197263,0.00003478965,0.006521206,0.002996228,0.1233132,0.004325339,0.3197071,0.001024207],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9715258,0.00009465536,0.000003157038,0.02708918,0.0003569735,0.0004510876,0.00004294778,0.00005521577,0.0003809066],"genre_scores_gemma":[0.9959815,0.00008201923,0.000005118852,0.002028228,0.0001854341,0.00006103529,0.0001072601,8.398525e-7,0.00154863],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8201565,"threshold_uncertainty_score":0.1560024,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0157577077992746,"score_gpt":0.186300871268904,"score_spread":0.1705431634696294,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}