{"id":"W4385683941","doi":"10.1128/mra.00456-23","title":"Complete genome sequence of <i>Mannheimia bovis</i> isolated from a healthy feedlot calf in Saskatchewan, Canada","year":2023,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Shared Health; University of Saskatchewan","funders":"","keywords":"Feedlot; Biology; Genome; Whole genome sequencing; Sequence (biology); Identification (biology); Veterinary medicine; Genetics; Animal science; Gene; Medicine; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000419114,0.000323612,0.000636893,0.0003481899,0.0002673154,0.00001726965,0.0005080175,0.0003441539,0.0007488004],"category_scores_gemma":[0.00004171033,0.0003212591,0.000106837,0.0009552972,0.0004203368,0.00005685917,0.0003368925,0.0005301934,0.0005324791],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003493336,"about_ca_system_score_gemma":0.001004418,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.4861587,"about_ca_topic_score_gemma":0.4881983,"domain_scores_codex":[0.996901,0.0005290067,0.0007736073,0.0006757947,0.00005681353,0.001063785],"domain_scores_gemma":[0.9988226,0.00020431,0.0002241324,0.0005224584,0.0001443186,0.00008216388],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005172944,0.0001542981,0.008285441,0.00003867762,0.0002172918,0.00003962293,0.0004226125,0.0001417786,0.9590811,0.000007791587,0.03081877,0.0002753398],"study_design_scores_gemma":[0.00320185,0.0004106837,0.003795427,0.00009467754,0.00003896835,0.00006080225,0.002375989,0.00002318287,0.003457259,0.00003023479,0.9860306,0.0004803457],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9671371,0.001624421,0.00002276617,0.0005617468,0.0004321907,0.0005562674,0.02929082,0.00009030967,0.0002843821],"genre_scores_gemma":[0.9487535,0.0001043697,0.00001816195,0.001553419,0.00004065202,0.00006143815,0.04589105,0.00004128641,0.00353614],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9556238,"threshold_uncertainty_score":0.9999239,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03011340178267318,"score_gpt":0.2676342528579743,"score_spread":0.2375208510753011,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}