{"id":"W4385684770","doi":"10.1158/1055-9965.epi-23-0275","title":"Germline Genetic Variants Associated with Somatic <i>TMPRSS2:ERG</i> Fusion Status in Prostate Cancer: A Genome-Wide Association Study","year":2023,"lang":"en","type":"review","venue":"Cancer Epidemiology Biomarkers & Prevention","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Division of Cancer Epidemiology and Genetics, National Cancer Institute; National Cancer Institute; Cancer Council Victoria; Canadian Institutes of Health Research; Manchester Biomedical Research Centre; National Heart, Lung, and Blood Institute; Vetenskapsrådet; Stockholms Läns Landsting; National Institute for Health and Care Research; Medical Research Council; Swedish Cancer Foundation; Breast Cancer Research Foundation; Petrus och Augusta Hedlunds Stiftelse; Ovarian Cancer Research Fund; Prostate Cancer Foundation of Australia; National Health and Medical Research Council; Cancer Research Institute; National Cancer Research Institute; Royal Marsden NHS Foundation Trust; National Institutes of Health; Rosetrees Trust; Pancreatic Cancer UK; Prostate Cancer Foundation; Cancer Research UK","keywords":"TMPRSS2; Prostate cancer; Genome-wide association study; Erg; Fusion gene; Single-nucleotide polymorphism; Biology; Oncology; Prostate; Cancer; Genetics; Internal medicine; Medicine; Gene; Disease; Genotype","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001582069,0.0005631979,0.0007416073,0.001032219,0.0004768048,0.000941873,0.0005999031,0.0007585309,0.001489381],"category_scores_gemma":[0.002810461,0.0003495442,0.003022991,0.002979724,0.0003901182,0.0002968388,0.0005404081,0.0008485095,0.0001435665],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003755975,"about_ca_system_score_gemma":0.0005246671,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00742756,"about_ca_topic_score_gemma":0.01100496,"domain_scores_codex":[0.998746,0.0003151471,0.0001204717,0.0005265978,0.0001688338,0.0001228359],"domain_scores_gemma":[0.9980631,0.0008707797,0.0005778811,0.00018789,0.0001721517,0.0001281289],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001444988,0.00005772683,0.9688932,0.0004835464,0.0173702,0.0007000195,0.000103242,0.0009569469,0.003074586,0.0001312348,0.0005118393,0.006272418],"study_design_scores_gemma":[0.0001619606,0.0002115614,0.9789366,0.00009616606,0.01715831,0.0008533928,0.0000908092,0.001003548,0.0004201376,0.0002143355,0.0008307344,0.00002249675],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.9816926,0.01524068,0.0007951575,0.0003207795,0.0000439741,0.00001754865,0.00141946,0.00003725977,0.0004325131],"genre_scores_gemma":[0.9970921,0.001788414,0.0003842911,0.00009528301,0.00003388619,0.0000106815,0.0005130277,0.000008506228,0.00007385151],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.00742756,"threshold_uncertainty_score":0.01476866,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07576902736174657,"score_gpt":0.3938474782780506,"score_spread":0.318078450916304,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}