{"id":"W4385741400","doi":"10.3390/ani13162577","title":"Commensal Escherichia coli Strains of Bovine Origin Competitively Mitigated Escherichia coli O157:H7 in a Gnotobiotic Murine Intestinal Colonization Model with or without Physiological Stress","year":2023,"lang":"en","type":"article","venue":"Animals","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Thompson Rivers University; University of Lethbridge; Canadian Food Inspection Agency; Public Health Agency of Canada; Alberta Health Services; Chinook Regional Hospital; University of Alberta; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; University of Alberta; University of Lethbridge","keywords":"Biology; Microbiology; Escherichia coli; Colonization; Pathogen; Colonisation resistance; Cecum; Host (biology); Bacteria; Microbiome; Gene; Genetics; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003260394,0.0003586355,0.000584224,0.0001131482,0.0001173141,0.0000320082,0.0003417342,0.0001797562,0.00003320117],"category_scores_gemma":[0.0005023053,0.0002815194,0.00006869138,0.0009872824,0.0005018419,0.00001298629,0.0003545353,0.0002980834,0.000008665123],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005268591,"about_ca_system_score_gemma":0.0004126777,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001765792,"about_ca_topic_score_gemma":0.0009287571,"domain_scores_codex":[0.9977825,0.0002423386,0.0004552506,0.0005876916,0.0003219142,0.0006102559],"domain_scores_gemma":[0.9988511,0.00008693554,0.0002125662,0.0003010541,0.0004028897,0.0001454146],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001762669,0.0004216379,0.07436309,0.0001620432,0.0001457024,0.00004856922,0.000176641,0.002161558,0.9196722,0.000292497,0.0007695443,0.00002387696],"study_design_scores_gemma":[0.00650742,0.01125403,0.6444588,0.0006080026,0.0001032362,0.00001392938,0.001682522,0.1516359,0.1819146,0.0001002974,0.0005447745,0.001176509],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977881,0.00008854371,0.0004601607,0.0002829764,0.00002403259,0.0008152099,0.0001763261,0.00007274845,0.0002919127],"genre_scores_gemma":[0.9942729,0.0001993686,0.004348976,0.00018873,0.0000710949,0.0001483218,0.0002555167,0.00005297412,0.0004621357],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7377576,"threshold_uncertainty_score":0.9999637,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04555077754807432,"score_gpt":0.318284590617684,"score_spread":0.2727338130696096,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}